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qs_5_scaffold_578

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_578_1
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..816)
DNA (816bp) protein (272aa)
Fibronectin type III domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X2S4_9EURY
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:ELY55995.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natrono
qs_5_scaffold_578_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1117..1368)
DNA (252bp) protein (84aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACM57287.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACM57287.1};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Putative circadian clock protein, KaiC n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPJ9_HALLT
qs_5_scaffold_578_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1564..2226)
DNA (663bp) protein (221aa)
Putative circadian clock protein, KaiC n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8V6_HALJB
putative circadian clock protein, KaiC
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ADJ14291.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkal
qs_5_scaffold_578_4
unknown

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3019..3159
DNA (141bp) protein (47aa)

This feature has no annotations

qs_5_scaffold_578_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3730..4635)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MLH3_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA38132.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_5_scaffold_578_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4835..7168)
DNA (2334bp) protein (778aa)
coxA1; cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEJ5_9EURY
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ELZ33890.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
qs_5_scaffold_578_7
unknown

Not on your lists

7457..7657
DNA (201bp) protein (67aa)

This feature has no annotations

qs_5_scaffold_578_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7847..8071)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LRK1_HALLT
Uncharacterized protein {ECO:0000313|EMBL:KKF39009.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_5_scaffold_578_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8167..8415
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:ACM57941.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_5_scaffold_578_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8400..10325)
DNA (1926bp) protein (642aa)
Rhomboid family protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7H1_9EURY
Rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AGN02907.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_5_scaffold_578_11
unknown

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10611..10910
DNA (300bp) protein (100aa)

This feature has no annotations

qs_5_scaffold_578_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11059..12183
DNA (1125bp) protein (375aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_0032
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI3_9EURY
qs_5_scaffold_578_13
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12180..13523
DNA (1344bp) protein (448aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ADB63157.1}; EC=1.3.3.4 {ECO:0000313|EMBL:ADB63157.1};; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Protoporphyrinogen oxidase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1B0_HALTV
qs_5_scaffold_578_14
unknown

Not on your lists

13568..13726
DNA (159bp) protein (53aa)

This feature has no annotations

qs_5_scaffold_578_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13660..15318)
DNA (1659bp) protein (553aa)
Putative signal-transducing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K2_9EURY
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:ELZ29607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
hypothetical protein
qs_5_scaffold_578_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15504..16523)
DNA (1020bp) protein (340aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
qs_5_scaffold_578_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16759..17409
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
qs_5_scaffold_578_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17528..18496
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_578_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18619..19194
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
qs_5_scaffold_578_20
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19269..20330
DNA (1062bp) protein (354aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halonotius sp. J07HN6 RepID=U1NTL6_9EURY
rRNA pseudouridine synthase, putative
qs_5_scaffold_578_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20425..20868)
DNA (444bp) protein (148aa)
Small-conductance mechanosensitive channel n=2 Tax=Halococcus hamelinensis RepID=M0LXA9_9EURY
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EMA36745.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
mscS; mechanosensitive ion channel
qs_5_scaffold_578_22
unknown

Not on your lists

20900..21652
DNA (753bp) protein (251aa)

This feature has no annotations

qs_5_scaffold_578_trna_1
unknown

Not on your lists

21531..21603
DNA (73bp)
transferRNA
qs_5_scaffold_578_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21998..22747)
DNA (750bp) protein (250aa)
hypothetical protein id=24649669 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_5_scaffold_578_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22873..23550
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
qs_5_scaffold_578_25
unknown

Not on your lists

23648..23899
DNA (252bp) protein (84aa)

This feature has no annotations

qs_5_scaffold_578_26
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24154..24600)
DNA (447bp) protein (149aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1227495 species="Archaea; Euryarchaeota
Dihydroxy-acid dehydratase n=1 Tax=Natronococcus occultus SP4 RepID=L0K2G3_9EURY
dihydroxyacid dehydratase/phosphogluconate dehydratase
Displaying 27 items

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