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qs_5_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_60_1
unknown

Not on your lists

3..113
DNA (111bp) protein (37aa)

This feature has no annotations

qs_5_scaffold_60_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

539..904
DNA (366bp) protein (122aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAB0_HALMO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMA42288.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
qs_5_scaffold_60_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1041..2222
DNA (1182bp) protein (394aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=931277 species="Arc
pri1; DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC27_HALMO
qs_5_scaffold_60_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2225..3298
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F762_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55042.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qs_5_scaffold_60_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3454..5382)
DNA (1929bp) protein (643aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS sensor histidine kinase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MVK2_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG94419.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
qs_5_scaffold_60_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5572..6231
DNA (660bp) protein (220aa)
Response regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDD6_9EURY
Sensor histidine kinase TmoS {ECO:0000313|EMBL:CQR50244.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
response regulator
qs_5_scaffold_60_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6455..7153)
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTX2_HALTV
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB61073.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena t
qs_5_scaffold_60_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7302..7814)
DNA (513bp) protein (171aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P465_HALMD
Bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ACV47887.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
qs_5_scaffold_60_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7898..8617)
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
qs_5_scaffold_60_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8878..9912
DNA (1035bp) protein (345aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7H6_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
qs_5_scaffold_60_11
unknown

Not on your lists

comp(10106..10252)
DNA (147bp) protein (49aa)

This feature has no annotations

qs_5_scaffold_60_12
unknown

Not on your lists

comp(10301..10513)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_5_scaffold_60_13
unknown

Not on your lists

comp(10528..10689)
DNA (162bp) protein (54aa)

This feature has no annotations

qs_5_scaffold_60_14
unknown

Not on your lists

comp(10698..10928)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_5_scaffold_60_15
unknown

Not on your lists

10935..11117
DNA (183bp) protein (61aa)

This feature has no annotations

qs_5_scaffold_60_16
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11445..11855
DNA (411bp) protein (137aa)
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF n=1 Tax=Halonotius sp. J07HN4 RepID=U1PCA2_9EURY
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF {ECO:0000313|EMBL:ERH07674.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" s
2Fe-2S iron-sulfur cluster binding domain-containing protein
qs_5_scaffold_60_17
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11885..13078)
DNA (1194bp) protein (398aa)
RNA methylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJV0_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ22918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
RNA methylase
qs_5_scaffold_60_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13194..13769
DNA (576bp) protein (192aa)
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
qs_5_scaffold_60_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13969..14445
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30033.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
endoribonuclease L-PSP
qs_5_scaffold_60_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14480..14851
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7S8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53608.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_5_scaffold_60_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15153..15998)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX64_9EURY
ATP phosphoribosyltransferase
qs_5_scaffold_60_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16506..17213)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42762.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_60_23
unknown

Not on your lists

comp(17401..17592)
DNA (192bp) protein (64aa)

This feature has no annotations

qs_5_scaffold_60_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18075..19442
DNA (1368bp) protein (456aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN27_9EURY
amidohydrolase
qs_5_scaffold_60_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19488..19877)
DNA (390bp) protein (130aa)
MaoC domain protein dehydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J662_HALJB
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADJ15780.1}; MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELY37196.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Hal
qs_5_scaffold_60_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19991..21256
DNA (1266bp) protein (422aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU5_9EURY
qs_5_scaffold_60_27
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21369..21890
DNA (522bp) protein (174aa)
Holliday junction resolvase Hjc {ECO:0000256|HAMAP-Rule:MF_01490}; Short=Hjc {ECO:0000256|HAMAP-Rule:MF_01490};; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_01490};; TaxID=1227460 species="Archaea; Euryarc
Holliday junction resolvase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GVV0_9EURY
hjc; Holliday junction resolvase
qs_5_scaffold_60_28
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21962..22885
DNA (924bp) protein (308aa)
Glyoxalase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JAT0_9EURY
Glyoxalase {ECO:0000313|EMBL:EMA06076.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
qs_5_scaffold_60_29
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22961..23221
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA52172.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_5_scaffold_60_30
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23249..24016)
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=2 Tax=Archaea RepID=U1QDU7_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ERH03472.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
ssuB; putative sulfonate ABC transporter ATP-binding protein
Displaying items 1-30 of 50 in total

View Taxonomy
NameRatio
Halobacteria
78.00%
unknown
22.00%
Halobacteria: 0.78unknown: 0.22Halobacteriaunknown