ggKbase home page

qs_5_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 65 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_102_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(689..1549)
DNA (861bp) protein (287aa)
Alpha amylase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M491_HALMO
Alpha amylase {ECO:0000313|EMBL:EMA39444.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
qs_5_scaffold_102_2
unknown

Not on your lists

comp(1583..2431)
DNA (849bp) protein (283aa)

This feature has no annotations

qs_5_scaffold_102_3
unknown

Not on your lists

comp(2858..3115)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_5_scaffold_102_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3386..4768
DNA (1383bp) protein (461aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM22_HALBP
qs_5_scaffold_102_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5026..5217)
DNA (192bp) protein (64aa)
hypothetical protein id=24628527 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91275.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
qs_5_scaffold_102_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5543..7888
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41540.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_5_scaffold_102_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8181..9137
DNA (957bp) protein (319aa)
Putative HTH-type transcriptional regulatory protein C450_04057 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA8_9EURY
Putative HTH-type transcriptional regulatory protein C450_04057 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
XRE family transcriptional regulator
qs_5_scaffold_102_8
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9324..9527
DNA (204bp) protein (68aa)
Major facilitator superfamily protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X7T7_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELY57662.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus je
sugar phosphate permease
qs_5_scaffold_102_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9784..10410
DNA (627bp) protein (209aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU42_NATPD
tp14; major facilitator family hexuronate transporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI48341.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_5_scaffold_102_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10746..12803
DNA (2058bp) protein (686aa)
UvrABC system protein B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBH3_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; excinuclease ABC subunit B
qs_5_scaffold_102_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12899..13309)
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQM9_9EURY
hypothetical protein
qs_5_scaffold_102_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13323..13694)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NF11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56436.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
transcriptional regulator of a riboflavin/FAD biosynthetic operon
qs_5_scaffold_102_13
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13909..14700)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJ85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95928.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_5_scaffold_102_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14840..15172
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA34596.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_5_scaffold_102_15
unknown

Not on your lists

comp(15295..15471)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_5_scaffold_102_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16625..17092)
DNA (468bp) protein (156aa)
Ferritin Dps family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAM0_9EURY
Ferritin Dps family protein {ECO:0000313|EMBL:EMA53705.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
dpsA2; ferritin / Dps domain protein
qs_5_scaffold_102_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17321..19354)
DNA (2034bp) protein (678aa)
UvrABC system protein C n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GWK1_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1324957 species="A
excinuclease ABC subunit C
qs_5_scaffold_102_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19539..20918)
DNA (1380bp) protein (460aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
hypothetical protein
qs_5_scaffold_102_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21171..22199
DNA (1029bp) protein (343aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICP0_9EURY
Copper ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG05045.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Haloba
ABC transporter
qs_5_scaffold_102_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22196..23029
DNA (834bp) protein (278aa)
ABC-2 type transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5B3_HALJB
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:ADJ13694.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
qs_5_scaffold_102_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23373..24329)
DNA (957bp) protein (319aa)
Divalent heavy-metal cations transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6X4_9EURY
Divalent heavy-metal cations transporter {ECO:0000313|EMBL:ELZ29904.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
divalent heavy-metal cations transporter
qs_5_scaffold_102_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24516..25331)
DNA (816bp) protein (272aa)
DtxR family iron (Metal) dependent repressor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK16_9EURY
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:EMA46017.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
DtxR family transcriptional regulator
qs_5_scaffold_102_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25670..25867)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46018.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_102_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25931..26374)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46018.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_102_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26565..28679)
DNA (2115bp) protein (705aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227457 species="Archaea
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6R1_9EURY
qs_5_scaffold_102_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28728..29483)
DNA (756bp) protein (252aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CCQ36976.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ36976.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRU7_NATM8
qs_5_scaffold_102_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29664..30893
DNA (1230bp) protein (410aa)
agxT; aminotransferase class V (serine--pyruvate aminotransferase / alanine--glyoxylate aminotransferase) (EC:2.6.1.-)
Alanine--glyoxylate transaminase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4F1_9EURY
Alanine--glyoxylate transaminase {ECO:0000313|EMBL:EMA52822.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
qs_5_scaffold_102_28
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31028..31237
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IEW2_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB16761.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_5_scaffold_102_29
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31331..31831)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6F9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40199.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_5_scaffold_102_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32077..33339)
DNA (1263bp) protein (421aa)
Sugar transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4L2_HALJB
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ADJ13574.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (str
Displaying items 1-30 of 65 in total

View Taxonomy