ggKbase home page

qs_5_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_207_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

206..829
DNA (624bp) protein (208aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQL3_HALUD
tRNA 2'-O-methylase
qs_5_scaffold_207_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(875..2860)
DNA (1986bp) protein (662aa)
Aldo/keto reductase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E3X3_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ42471.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;
aldo/keto reductase
qs_5_scaffold_207_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3570..3803
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTD3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37714.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_5_scaffold_207_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3803..4732
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1Q5R3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH00317.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qs_5_scaffold_207_5
unknown

Not on your lists

comp(5061..5795)
DNA (735bp) protein (245aa)

This feature has no annotations

qs_5_scaffold_207_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6039..7244)
DNA (1206bp) protein (402aa)
Xaa-pro aminopeptidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJQ3_9EURY
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
Xaa-Pro aminopeptidase
qs_5_scaffold_207_7
unknown

Not on your lists

7362..7721
DNA (360bp) protein (120aa)

This feature has no annotations

qs_5_scaffold_207_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7908..8846
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5F3_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ18445.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
putative hydrolase or acyltransferase of alpha/beta superfamily
qs_5_scaffold_207_trna_2
unknown

Not on your lists

comp(8784..8857)
DNA (74bp)
transferRNA
qs_5_scaffold_207_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9137..9685
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46304.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_5_scaffold_207_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9912..10118
DNA (207bp) protein (69aa)
transcriptional regulator, CopG family id=24654776 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ERG89722.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
transcriptional regulator, CopG family
qs_5_scaffold_207_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10120..11310
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUW1_HALVA
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
cell division protein FtsZ
qs_5_scaffold_207_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11509..12561)
DNA (1053bp) protein (351aa)
arginosuccinate synthase n=1 Tax=Halorubrum sp. T3 RepID=UPI00036F40DB
PP-loop domain protein {ECO:0000313|EMBL:EMA61625.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
PP-loop domain protein
qs_5_scaffold_207_13
unknown

Not on your lists

comp(12845..13402)
DNA (558bp) protein (186aa)

This feature has no annotations

qs_5_scaffold_207_14
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13408..14712
DNA (1305bp) protein (435aa)
Arabinose efflux permease family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HVB5_9EURY
Arabinose efflux permease family protein {ECO:0000313|EMBL:ELZ87703.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elong
putative MFS superfamily, multidrug transport protein
qs_5_scaffold_207_15
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14759..16696)
DNA (1938bp) protein (646aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTJ4_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY40312.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
glycoside hydrolase 15-like protein
qs_5_scaffold_207_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16934..18919)
DNA (1986bp) protein (662aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBD2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA53970.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycosyl hydrolase, glucoamylase
qs_5_scaffold_207_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19390..20052
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_207_18
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

20184..20471
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CXM7_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD27452.1, ECO:0000313|EnsemblProtists:EOD27452}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emili
hydrolase
qs_5_scaffold_207_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20499..21359)
DNA (861bp) protein (287aa)
endodeoxyribonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJK1_9EURY
qs_5_scaffold_207_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22142..22678
DNA (537bp) protein (179aa)
Peroxiredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A5Y4_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EJN60893.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peroxiredoxin
qs_5_scaffold_207_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22777..23625)
DNA (849bp) protein (283aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDB2_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA43338.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
lipoate-protein ligase A
qs_5_scaffold_207_22

Not on your lists

24192..24902
DNA (711bp) protein (237aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX02_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS06778.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
N-acetyltransferase GCN5
qs_5_scaffold_207_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25004..25390)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_5_scaffold_207_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26070..27137
DNA (1068bp) protein (356aa)
5'-nucleotidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GUQ7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ESP88856.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrr
5'-nucleotidase
qs_5_scaffold_207_25
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27172..28521
DNA (1350bp) protein (450aa)
5'-nucleotidase family hydrolase n=2 Tax=Halobacterium salinarum RepID=B0R5M3_HALS3
5'-nucleotidase
5'-nucleotidase family hydrolase {ECO:0000313|EMBL:CAP14040.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sa
qs_5_scaffold_207_26
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28646..29050
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IF88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94114.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
universal stress family protein
qs_5_scaffold_207_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29219..30535)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
qs_5_scaffold_207_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31302..31586
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_207_29
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31737..32132
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZY8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37674.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
Displaying items 1-30 of 37 in total

View Taxonomy