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qs_5_scaffold_245

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_245_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..144
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A6W3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61268.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_5_scaffold_245_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(243..2459)
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46296.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_245_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2718..3395)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3M7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52522.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_245_4
unknown

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comp(3355..3582)
DNA (228bp) protein (76aa)

This feature has no annotations

qs_5_scaffold_245_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3563..3865)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ABS5_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71343.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qs_5_scaffold_245_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4310..5353
DNA (1044bp) protein (348aa)
leuA2; 2-isopropylmalate synthase (EC:2.3.3.13)
LeuA1 protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHT3_9EURY
LeuA1 protein {ECO:0000313|EMBL:EJN61274.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_5_scaffold_245_7

Not on your lists

5800..7779
DNA (1980bp) protein (660aa)
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetolactate synthase n=1 Tax=halophilic archaeon DL31 RepID=G2MKR2_9ARCH
qs_5_scaffold_245_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7776..8567
DNA (792bp) protein (264aa)
Acetolactate synthase small subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXT3_9EURY
Acetolactate synthase small subunit {ECO:0000313|EMBL:EMA50411.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
acetolactate synthase, small subunit
qs_5_scaffold_245_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8560..9705
DNA (1146bp) protein (382aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHE1_9EURY
qs_5_scaffold_245_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9702..10121
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50409.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_5_scaffold_245_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10118..11539
DNA (1422bp) protein (474aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
Isopropylmalate isomerase large subunit {ECO:0000313|EMBL:ADJ15489.1}; EC=4.2.1.33 {ECO:0000313|EMBL:ADJ15489.1};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Isopropylmalate isomerase large subunit n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4M2_HALJB
qs_5_scaffold_245_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11536..12321
DNA (786bp) protein (262aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase, small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L4_9EURY
3-isopropylmalate dehydratase, small subunit {ECO:0000313|EMBL:EMA52507.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
qs_5_scaffold_245_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12318..13322
DNA (1005bp) protein (335aa)
ipmD; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3S9_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EMA52506.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
qs_5_scaffold_245_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13479..13625
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44676.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_245_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13704..14249)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F004_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61287.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_5_scaffold_245_trna_1
unknown

Not on your lists

comp(14413..14485)
DNA (73bp)
transferRNA
qs_5_scaffold_245_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14599..15183)
DNA (585bp) protein (195aa)
Ferredoxin 2Fe-2S n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRX7_HALMO
Ferredoxin 2Fe-2S {ECO:0000313|EMBL:EMA48108.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
ferredoxin
qs_5_scaffold_245_17
unknown

Not on your lists

comp(15262..15354)
DNA (93bp) protein (31aa)

This feature has no annotations

qs_5_scaffold_245_18
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15712..16380)
DNA (669bp) protein (223aa)
Methyltransferase type 11 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MCX6_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA42260.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JC
type 11 methyltransferase
qs_5_scaffold_245_19
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16513..16770)
DNA (258bp) protein (86aa)
Translation initiation factor 1A n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAW7_HALMT
eif1A2; translation initiation factor IF-1
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofera
qs_5_scaffold_245_20

Not on your lists

comp(16910..17704)
DNA (795bp) protein (265aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=uncultured archaeon A07HB70 RepID=V4XT86_9ARCH
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ESS05403.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
type 11 methyltransferase
qs_5_scaffold_245_21

Not on your lists

17845..19782
DNA (1938bp) protein (646aa)
Putative Fe-S oxidoreductase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y349_9ARCH
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:ESS05402.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Fe-S oxidoreductase
qs_5_scaffold_245_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19948..20694)
DNA (747bp) protein (249aa)
2-keto-4-pentenoate hydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAG4_9EURY
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EMA41385.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
qs_5_scaffold_245_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20873..21280
DNA (408bp) protein (136aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J3JEY6_9EURY
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EJN58779.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ATP/cobalamin adenosyltransferase
qs_5_scaffold_245_24
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21456..21644)
DNA (189bp) protein (63aa)
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADG05958.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM
qs_5_scaffold_245_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22350..22877
DNA (528bp) protein (176aa)
A-G-specific adenine glycosylase protein {ECO:0000313|EMBL:ERJ07007.1}; EC=3.2.2.- {ECO:0000313|EMBL:ERJ07007.1};; NUDIX hydrolase family protein {ECO:0000313|EMBL:CCQ34777.1}; TaxID=1033806 species="
A-G-specific adenine glycosylase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKD7_9EURY
NUDIX hydrolase family protein
qs_5_scaffold_245_26
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22975..24561
DNA (1587bp) protein (529aa)
Amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ACM58470.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ACM58470.1};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
Amidase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW80_HALLT
qs_5_scaffold_245_27
unknown

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24792..24881
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 28 items

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