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qs_5_scaffold_198

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_198_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YRY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51760.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
multi-sensor signal transduction histidine kinase
qs_5_scaffold_198_2
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(424..891)
DNA (468bp) protein (156aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y6B7_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELY68448.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinem
multi-sensor signal transduction histidine kinase
qs_5_scaffold_198_trna_2
unknown

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comp(1129..1201)
DNA (73bp)
transferRNA
qs_5_scaffold_198_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1263..1766
DNA (504bp) protein (168aa)
Superfamily II helicase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP01_9EURY
Superfamily II helicase-like protein {ECO:0000313|EMBL:EFW93654.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
helicase
qs_5_scaffold_198_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1800..2222)
DNA (423bp) protein (141aa)
CopG family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMJ1_NATPD
hypothetical protein
CopG domain protein {ECO:0000313|EMBL:CAI50667.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_5_scaffold_198_5
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2587..3234
DNA (648bp) protein (216aa)
histidine ammonia-lyase (EC:4.3.1.3)
Probable histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229};; TaxID=694430 species="Archaea; Eu
Probable histidine ammonia-lyase n=1 Tax=Natronococcus occultus SP4 RepID=L0K1U1_9EURY
qs_5_scaffold_198_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3244..3861)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P379_9EURY
DNA-binding protein {ECO:0000313|EMBL:KDS91330.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_5_scaffold_198_7
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3863..4792)
DNA (930bp) protein (310aa)
Replication factor A n=2 Tax=Haloferax RepID=M0GX56_9EURY
OB-fold tRNA/helicase-type nucleic acid binding-protein
Replication factor A {ECO:0000313|EMBL:ELZ75439.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
qs_5_scaffold_198_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4963..5247
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT01_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48734.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_5_scaffold_198_9
unknown

Not on your lists

5561..6253
DNA (693bp) protein (231aa)

This feature has no annotations

qs_5_scaffold_198_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6276..7292
DNA (1017bp) protein (339aa)
manC; mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB9_9EURY
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ELZ27501.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
qs_5_scaffold_198_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7325..7786)
DNA (462bp) protein (154aa)
DNA-binding protein, tfx family n=1 Tax=Halogranum salarium B-1 RepID=J3JG12_9EURY
DNA-binding protein, tfx family {ECO:0000313|EMBL:EJN59734.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
tfx; transcriptional regulator
qs_5_scaffold_198_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7924..8424)
DNA (501bp) protein (167aa)
Deoxyribonuclease/rho domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5C8_9EURY
Deoxyribonuclease/rho domain-containing protein {ECO:0000313|EMBL:EMA40603.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase
qs_5_scaffold_198_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8616..9296
DNA (681bp) protein (227aa)
hypothetical protein id=24614869 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ELZ30453.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_5_scaffold_198_14
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9384..11147
DNA (1764bp) protein (588aa)
Citrate transporter n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZYV5_9EURY
Citrate transporter {ECO:0000313|EMBL:ELY91261.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
tp27; transport protein
qs_5_scaffold_198_trna_1
unknown

Not on your lists

11193..11265
DNA (73bp)
transferRNA
qs_5_scaffold_198_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11451..12602
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MLT7_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46616.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_5_scaffold_198_16

Not on your lists

12647..13120
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQP7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07946.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_5_scaffold_198_17

Not on your lists

comp(13021..14196)
DNA (1176bp) protein (392aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_5_scaffold_198_18

Not on your lists

comp(14234..15607)
DNA (1374bp) protein (458aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qs_5_scaffold_198_19

Not on your lists

15763..16638
DNA (876bp) protein (292aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ESS11176.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_5_scaffold_198_20
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16655..17434
DNA (780bp) protein (260aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
qs_5_scaffold_198_21
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17437..18147
DNA (711bp) protein (237aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Archaea RepID=U1P191_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03664.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
qs_5_scaffold_198_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18265..20361
DNA (2097bp) protein (699aa)
MCM family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7L0_9EURY
MCM family protein {ECO:0000313|EMBL:EMA40584.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
MCM family protein
qs_5_scaffold_198_23
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20851..21087
DNA (237bp) protein (79aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialba
Probable RNA 2'-phosphotransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWJ2_9EURY
RNA:NAD 2'-phosphotransferase
qs_5_scaffold_198_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21214..21513
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6X3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28853.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_5_scaffold_198_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21581..21850
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LR62_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34525.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_5_scaffold_198_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21899..22237
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MNS0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ELZ28855.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_198_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22497..22961
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D022_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28856.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_198_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22992..23756
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYX5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14582.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
Displaying 30 items

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