ggKbase home page

qs_5_scaffold_953

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_953_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(122..1138)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTZ2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37969.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_5_scaffold_953_2
unknown

Not on your lists

comp(1366..2088)
DNA (723bp) protein (241aa)

This feature has no annotations

qs_5_scaffold_953_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2551..4329)
DNA (1779bp) protein (593aa)
PAS domain S-box n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7V4_9EURY
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGN00104.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_5_scaffold_953_4
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4502..5854
DNA (1353bp) protein (451aa)
Major facilitator family hexuronate transporter n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G101_9EURY
Major facilitator family hexuronate transporter {ECO:0000313|EMBL:ELZ65248.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
tp14; major facilitator family hexuronate transporter
qs_5_scaffold_953_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5851..6579)
DNA (729bp) protein (243aa)
Uracil-DNA glycosylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA3_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:ELZ28200.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
uracil-DNA glycosylase
qs_5_scaffold_953_6
unknown

Not on your lists

6673..6858
DNA (186bp) protein (62aa)

This feature has no annotations

qs_5_scaffold_953_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6910..7320)
DNA (411bp) protein (137aa)
Universal stress protein UspA-like protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLB3_HALBP
universal stress protein uspa-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:ADQ68362.1}; Universal stress protein uspa-like protein {ECO:0000313|EMBL:ELY31325.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
qs_5_scaffold_953_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7377..7604)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LRK1_HALLT
Uncharacterized protein {ECO:0000313|EMBL:KKF39009.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_5_scaffold_953_9
unknown

Not on your lists

7718..7966
DNA (249bp) protein (83aa)

This feature has no annotations

qs_5_scaffold_953_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8089..8964
DNA (876bp) protein (292aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1495067 species="Archaea; E
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRG6_9EURY
qs_5_scaffold_953_11
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9824..10114)
DNA (291bp) protein (97aa)
id=24653898 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24653898 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
qs_5_scaffold_953_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10222..11310
DNA (1089bp) protein (363aa)
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=268739 species="Archaea; Eu
Isoleucine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTC8_NATM8
qs_5_scaffold_953_13
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11394..11720)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9Y2_HALMT
hypothetical protein
VanZ like family protein {ECO:0000313|EMBL:ELZ94479.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.
qs_5_scaffold_953_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11930..12628
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C8K2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18687.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_5_scaffold_953_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13009..16431)
DNA (3423bp) protein (1141aa)
PAS sensor histidine kinase n=1 Tax=Halonotius sp. J07HN4 RepID=U1QG35_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH05778.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
multi-sensor signal transduction histidine kinase
qs_5_scaffold_953_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17061..17324)
DNA (264bp) protein (88aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTC1_NATM8
qs_5_scaffold_953_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17970..18506
DNA (537bp) protein (179aa)
Sodium-dependent phosphate transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D491_9EURY
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:ELZ30265.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
sodium-dependent phosphate transporter
Displaying 17 items

View Taxonomy