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qs_5_scaffold_1089

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_1089_1
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..211)
DNA (210bp) protein (70aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9T879_COREQ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGD21483.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.
ABC transporter ATPase
qs_5_scaffold_1089_2
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(302..1492)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0INE5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96984.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
probable cell surface glycoprotein
qs_5_scaffold_1089_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1506..5246)
DNA (3741bp) protein (1247aa)
Putative trimeric autotransporter adhesin n=4 Tax=Haemophilus influenzae RepID=E7A427_HAEIF
Uncharacterized protein {ECO:0000313|EMBL:EMA02073.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
baaA1; trimeric autotransporter adhesin
qs_5_scaffold_1089_4
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5547..6749
DNA (1203bp) protein (401aa)
Cell surface glycoprotein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H2F4_9EURY
Cell surface glycoprotein {ECO:0000313|EMBL:ELZ77958.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;
cell surface glycoprotein
qs_5_scaffold_1089_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6780..7004)
DNA (225bp) protein (75aa)
Uncharacterized protein id=24615050 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88558.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_5_scaffold_1089_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7096..7983)
DNA (888bp) protein (296aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1227455 sp
Undecaprenyl-diphosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR50_9EURY
bacitracin resistance protein BacA
qs_5_scaffold_1089_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8313..8810
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J357_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15164.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_5_scaffold_1089_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8884..10413
DNA (1530bp) protein (510aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=485914 s
pseudouridylate synthase n=1 Tax=Halomicrobium katesii RepID=UPI00037FA66A
THUMP domain-containing protein
qs_5_scaffold_1089_9
unknown

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10437..10556
DNA (120bp) protein (40aa)

This feature has no annotations

qs_5_scaffold_1089_10
unknown

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comp(10663..11154)
DNA (492bp) protein (164aa)

This feature has no annotations

qs_5_scaffold_1089_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11291..12049)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ2_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46167.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_5_scaffold_1089_12
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12080..13507)
DNA (1428bp) protein (476aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZRH6_9EURY
tRNA pseudouridine synthase, TruD family
qs_5_scaffold_1089_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13725..14072)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei RepID=I3R489_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY46112.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qs_5_scaffold_1089_14
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14120..14359
DNA (240bp) protein (80aa)
Cold-shock DNA-binding domain protein n=2 Tax=Halorubrum RepID=B9LPC7_HALLT
cold-shock DNA-binding domain protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ELZ42688.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccha
qs_5_scaffold_1089_15
unknown

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14681..14752
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 15 items

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