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qs_5_scaffold_617

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_617_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..240)
DNA (240bp) protein (80aa)
redox protein, regulator of disulfide bond formation id=24641249 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:ERH11334.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
OsmC domain protein
qs_5_scaffold_617_2
unknown

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424..807
DNA (384bp) protein (128aa)

This feature has no annotations

qs_5_scaffold_617_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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886..1686
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI6_NATPD
tif2a; translation initiation factor IF-2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=348780 species="Arch
qs_5_scaffold_617_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1749..1964
DNA (216bp) protein (72aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8U9_9EURY
H/ACA RNA-protein complex component Nop10p
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp
qs_5_scaffold_617_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2291..3247
DNA (957bp) protein (319aa)
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBT4_HALXS
G6PDH family F420-dependent oxidoreductase
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:AEH38722.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanad
qs_5_scaffold_617_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3249..4802)
DNA (1554bp) protein (518aa)
FAD dependent oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9I2_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ19895.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
FAD dependent oxidoreductase
qs_5_scaffold_617_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4923..5180)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27651.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_617_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5279..6247)
DNA (969bp) protein (323aa)
A/G-specific DNA glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L9I0_HALJP
Adenine glycosylase {ECO:0000313|EMBL:KKF39185.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
qs_5_scaffold_617_9
unknown

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comp(6349..6576)
DNA (228bp) protein (76aa)

This feature has no annotations

qs_5_scaffold_617_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6642..6941)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JT13_9EURY
DoxX {ECO:0000313|EMBL:CQR50602.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qs_5_scaffold_617_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7194..7859
DNA (666bp) protein (222aa)
transcriptional activator, TenA family (EC:3.5.99.2)
Transcriptional activator, TenA family {ECO:0000313|EMBL:ACV10870.1}; EC=3.5.99.2 {ECO:0000313|EMBL:ACV10870.1};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Transcriptional activator, TenA family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTE8_HALUD
qs_5_scaffold_617_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7856..8650
DNA (795bp) protein (265aa)
tenA-2; transcriptional activator TenA (EC:3.5.99.2)
Transcriptional activator TenA {ECO:0000313|EMBL:AFK21126.1}; EC=3.5.99.2 {ECO:0000313|EMBL:AFK21126.1};; Transcriptional regulator {ECO:0000313|EMBL:AHZ24289.1}; TaxID=523841 species="Archaea; Euryar
Transcriptional activator TenA n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RA66_HALMT
qs_5_scaffold_617_13
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8779..9087
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z0V0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY80130.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qs_5_scaffold_617_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9115..9930)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RRM8_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60588.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_5_scaffold_617_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10143..11864)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZD8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02640.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 15 items

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