ggKbase home page

qs_5_scaffold_2486

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_2486_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..741)
DNA (741bp) protein (247aa)
Transcription initiation factor IIB n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCV5_HALAR
tfb4; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_5_scaffold_2486_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

940..1236
DNA (297bp) protein (99aa)
aatC; aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR7_NATPD
qs_5_scaffold_2486_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1214..1651)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Uncharacterized protein id=3779679 bin=GWA2_Methylomirabilis_73_35 species=Zea mays genus=Zea taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
qs_5_scaffold_2486_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2234..2446
DNA (213bp) protein (71aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=133352
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W2F9_9EURY
qs_5_scaffold_2486_5
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2586..3359)
DNA (774bp) protein (258aa)
CAAX amino terminal protease family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FYH9_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ELZ65116.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax pr
CAAX amino terminal protease family protein
qs_5_scaffold_2486_6
unknown

Not on your lists

comp(3401..3574)
DNA (174bp) protein (58aa)

This feature has no annotations

qs_5_scaffold_2486_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3577..4098)
DNA (522bp) protein (174aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR4_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48821.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_5_scaffold_2486_8
unknown

Not on your lists

comp(4105..4260)
DNA (156bp) protein (52aa)

This feature has no annotations

qs_5_scaffold_2486_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4342..5130)
DNA (789bp) protein (263aa)
fadA_5; enoyl-CoA hydratase I 5 (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAI48822.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAI48822.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR3_NATPD
qs_5_scaffold_2486_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5308..6075)
DNA (768bp) protein (256aa)
dehydrogenase/reductase 6 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50174.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50174.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX8_NATPD
qs_5_scaffold_2486_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6158..6442
DNA (285bp) protein (95aa)
rpoL; DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L {ECO:0000255|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00261};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit L n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOL_NATPD
qs_5_scaffold_2486_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6458..6874)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36598.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
Displaying 12 items

View Taxonomy