ggKbase home page

qs_5_scaffold_3281

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_3281_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..780
DNA (780bp) protein (260aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227456 species="Archaea; Euryarchae
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFC0_9EURY
qs_5_scaffold_3281_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

935..1675
DNA (741bp) protein (247aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
pcrB; (S)-3-O-geranylgeranylglyceryl phosphate synthase 1 (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM28_9EURY
qs_5_scaffold_3281_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1739..2077
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46746.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_3281_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2223..2714)
DNA (492bp) protein (164aa)
Asn family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N729_9EURY
Asn family transcriptional regulator {ECO:0000313|EMBL:EMA53363.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
asnC4; AsnC family transcriptional regulator
qs_5_scaffold_3281_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2759..4126)
DNA (1368bp) protein (456aa)
Amino acid permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MS06_9EURY
Amino acid permease {ECO:0000313|EMBL:EMA47250.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
amino acid transporter
qs_5_scaffold_3281_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4126..4866)
DNA (741bp) protein (247aa)
Amino acid permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MS06_9EURY
Amino acid permease {ECO:0000313|EMBL:EMA47250.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
cationic amino acids transporter/stress response protein
qs_5_scaffold_3281_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4866..5381)
DNA (516bp) protein (172aa)
Potassium channel-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0QSL9_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA43642.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
qs_5_scaffold_3281_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5733..6752
DNA (1020bp) protein (340aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQI7_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EMA46745.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
qs_5_scaffold_3281_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6753..7271)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PK41_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70402.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qs_5_scaffold_3281_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7268..7570)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVU5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA49731.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_5_scaffold_3281_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8104..9102
DNA (999bp) protein (333aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3 1.2.1.8)
Aldehyde Dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPT3_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA46744.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
qs_5_scaffold_3281_12
unknown

Not on your lists

comp(9210..9326)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 12 items

View Taxonomy