ggKbase home page

qs_5_scaffold_2581

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_2581_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(78..377)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qs_5_scaffold_2581_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(379..1134)
DNA (756bp) protein (252aa)
TPR repeat-containing protein id=24644464 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
qs_5_scaffold_2581_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1188..1745
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=797114 species="Ar
2'-5' RNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D661_9EURY
2'-5' RNA ligase
qs_5_scaffold_2581_4

Not on your lists

1988..2140
DNA (153bp) protein (51aa)
Ribosomal protein L39e n=1 Tax=uncultured organism RepID=M1P2K2_9ZZZZ
Ribosomal protein L39e {ECO:0000313|EMBL:AGF93646.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
rpl39R; 50S ribosomal protein L39.eR
qs_5_scaffold_2581_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2137..2415
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AG12_NATGS
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
qs_5_scaffold_2581_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2418..3086
DNA (669bp) protein (223aa)
translation initiation factor eIF-6; K03264 translation initiation factor 6 id=24644470 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor IF-6
qs_5_scaffold_2581_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3244..4206
DNA (963bp) protein (321aa)
phytoene synthase (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] id=24647557 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
phytoene/squalene synthetase
qs_5_scaffold_2581_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4228..5064)
DNA (837bp) protein (279aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P867_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ERG89752.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
carotenoid biosynthesis protein
qs_5_scaffold_2581_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5057..5941)
DNA (885bp) protein (295aa)
lye; lycopene elongase (EC:2.5.1.-)
UbiA prenyltransferase n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCD1_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:ERG89751.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qs_5_scaffold_2581_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6203..7120
DNA (918bp) protein (306aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
etfB2; electron transfer flavoprotein subunit beta
qs_5_scaffold_2581_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7123..7545
DNA (423bp) protein (141aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
Displaying 11 items

View Taxonomy