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qs_5_scaffold_2170

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_2170_1
RLO_PLX_64_10, Bacteria

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comp(2..178)
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
qs_5_scaffold_2170_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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204..953
DNA (750bp) protein (250aa)
Acyl-CoA dehydrogenase n=3 Tax=Haloarcula RepID=G0HUK8_HALHT
acdD; acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AEM57455.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_5_scaffold_2170_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1081..1797
DNA (717bp) protein (239aa)
Metallo-beta-lactamase family hydrolase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JLB9_HALVA
Metallo-beta-lactamase family hydrolase {ECO:0000313|EMBL:EMA09123.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula v
metallo-beta-lactamase family hydrolase
qs_5_scaffold_2170_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1764..1964)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFX9_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA18745.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qs_5_scaffold_2170_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1964..2422)
DNA (459bp) protein (153aa)
Putative sensor protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6B8_9EURY
Putative sensor protein {ECO:0000313|EMBL:EMA15699.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
histidine kinase
qs_5_scaffold_2170_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2920..4818
DNA (1899bp) protein (633aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN66_HALVA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:EMA09120.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
2-ketoglutarate ferredoxin oxidoreductase subunit alpha rbh
qs_5_scaffold_2170_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4821..5759
DNA (939bp) protein (313aa)
korB; 2-ketoglutarate ferredoxin oxidoreductase (beta) (EC:1.2.7.1 1.2.7.3)
Pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta n=4 Tax=Haloarcula RepID=M0JMB9_HALVA
Pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EMA33009.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
qs_5_scaffold_2170_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5823..6251
DNA (429bp) protein (143aa)
AsnC family transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JLB5_HALVA
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA09118.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
asnC3; AsnC family transcriptional regulator
qs_5_scaffold_2170_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6286..7782
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJ18_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09117.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
phosphoesterase RecJ domain-containing protein
qs_5_scaffold_2170_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8253..8555
DNA (303bp) protein (101aa)
Inosine monophosphate dehydrogenase/GMP reductase n=3 Tax=Haloarcula RepID=Q5V2P0_HALMA
hypothetical protein
Inosine monophosphate dehydrogenase/GMP reductase {ECO:0000313|EMBL:EMA17253.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
qs_5_scaffold_2170_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8591..8809
DNA (219bp) protein (73aa)
DNA-3-methyladenine glycosylase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGI7_HALVA
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EMA08086.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
DNA-3-methyladenine glycosylase
qs_5_scaffold_2170_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9700..10095
DNA (396bp) protein (132aa)
Succinate dehydrogenase subunit C n=4 Tax=Haloarcula RepID=Q5V349_HALMA
sdhC; succinate dehydrogenase subunit C
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EMA12474.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
qs_5_scaffold_2170_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10205..10414
DNA (210bp) protein (70aa)
Succinate dehydrogenase subunit D n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JG55_HALVA
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EMA08082.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallism
hypothetical protein
qs_5_scaffold_2170_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10411..11295
DNA (885bp) protein (295aa)
sdhB; succinate dehydrogenase iron-sulfur protein subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur protein subunit {ECO:0000313|EMBL:AAV46055.1}; EC=1.3.99.1 {ECO:0000313|EMBL:AAV46055.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Succinate dehydrogenase iron-sulfur protein subunit n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V347_HALMA
qs_5_scaffold_2170_15
unknown

Not on your lists

comp(11323..11682)
DNA (360bp) protein (120aa)

This feature has no annotations

qs_5_scaffold_2170_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11884..13713
DNA (1830bp) protein (610aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KR71_9EURY
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EMA22699.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
succinate dehydrogenase
qs_5_scaffold_2170_17
unknown

Not on your lists

comp(13862..14161)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_5_scaffold_2170_trna_1
unknown

Not on your lists

14057..14160
DNA (104bp)
transferRNA
qs_5_scaffold_2170_18
unknown

Not on your lists

14236..14385
DNA (150bp) protein (50aa)

This feature has no annotations

qs_5_scaffold_2170_trna_2
unknown

Not on your lists

comp(14673..14757)
DNA (85bp)
transferRNA
qs_5_scaffold_2170_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14748..15410)
DNA (663bp) protein (221aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PGN3_9EURY
ligB; DNA ligase (ATP)
Displaying 21 items

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