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qs_5_scaffold_5383

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_5383_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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303..641
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1227453 species="Archaea; Euryarchaeota;
Peptidyl-tRNA hydrolase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KKA8_9EURY
qs_5_scaffold_5383_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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720..1454
DNA (735bp) protein (245aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA2; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEG6_HALVA
qs_5_scaffold_5383_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1454..2146
DNA (693bp) protein (231aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LM99_HALJP
qs_5_scaffold_5383_4
unknown

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comp(2182..2316)
DNA (135bp) protein (45aa)

This feature has no annotations

qs_5_scaffold_5383_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2521..3066
DNA (546bp) protein (182aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6M9_9EURY
Displaying 5 items

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