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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 1-50 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_6_scaffold_32 232 227174 bp 55.69 11.58 76.22
qs_6_scaffold_0 212 218486 bp 53.55 31.58 85.77
qs_6_scaffold_75 201 199817 bp 54.81 11.36 77.10
qs_6_scaffold_15
Order: Halobacteriales (57.95%)
195 190889 bp 63.50 34.35 86.92
qs_6_scaffold_7 195 176133 bp 56.50 11.29 78.14
qs_6_scaffold_6 192 208702 bp 56.08 11.34 75.66
qs_6_scaffold_1
Class: Halobacteria (50.28%)
177 145543 bp 58.48 59.50 82.62
qs_6_scaffold_9 173 159537 bp 55.14 11.36 77.45
qs_6_scaffold_5 154 95861 bp 57.20 22.87 87.33
qs_6_scaffold_170
Class: Halobacteria (59.06%)
149 143021 bp 60.47 19.35 80.63
qs_6_scaffold_16 139 91870 bp 51.58 27.54 84.71
qs_6_scaffold_91 137 113544 bp 59.93 11.80 78.37
qs_6_scaffold_66 129 124013 bp 55.98 11.55 78.93
qs_6_scaffold_30 127 120936 bp 55.19 11.66 82.15
qs_6_scaffold_77 122 103566 bp 54.69 11.78 72.92
qs_6_scaffold_85 121 156253 bp 55.16 11.29 75.61
qs_6_scaffold_35 119 113310 bp 54.98 11.60 72.61
qs_6_scaffold_23 118 107911 bp 54.42 11.69 72.15
qs_6_scaffold_68 117 131816 bp 56.08 11.50 73.59
qs_6_scaffold_61 116 121127 bp 55.44 11.71 73.79
qs_6_scaffold_272 114 113934 bp 56.08 11.80 79.62
qs_6_scaffold_109 114 70025 bp 53.44 16.93 88.72
qs_6_scaffold_81 112 104363 bp 54.90 11.41 75.36
qs_6_scaffold_208 103 112227 bp 56.62 11.31 75.21
qs_6_scaffold_265 101 87013 bp 55.64 11.07 76.75
qs_6_scaffold_120 101 88614 bp 57.70 11.46 77.85
qs_6_scaffold_40
Class: Halobacteria (80.2%)
101 99762 bp 57.24 58.74 86.10
qs_6_scaffold_158 98 99309 bp 55.35 11.61 74.21
qs_6_scaffold_46 98 118479 bp 56.49 11.20 77.07
qs_6_scaffold_142 93 89514 bp 60.00 16.62 86.59
qs_6_scaffold_31
Order: Halobacteriales (64.52%)
93 87886 bp 62.52 35.01 87.03
qs_6_scaffold_34 92 98126 bp 55.39 11.75 72.57
qs_6_scaffold_268 90 75837 bp 55.20 11.79 73.97
qs_6_scaffold_37 87 100832 bp 53.65 11.72 65.65
qs_6_scaffold_110 87 103027 bp 54.73 11.79 73.06
qs_6_scaffold_117
Order: Haloferacales (56.32%)
87 97202 bp 70.59 20.95 82.46
qs_6_scaffold_19 84 85042 bp 55.33 11.61 75.05
qs_6_scaffold_107 84 109423 bp 56.04 11.28 81.58
qs_6_scaffold_411 83 83604 bp 55.09 11.56 73.29
qs_6_scaffold_222 82 88415 bp 55.52 10.94 76.92
qs_6_scaffold_197 81 47752 bp 65.35 14.50 89.95
qs_6_scaffold_99 81 72865 bp 55.89 11.35 77.47
qs_6_scaffold_87 80 106020 bp 55.77 10.90 73.89
qs_6_scaffold_163 79 68973 bp 54.50 11.72 69.44
qs_6_scaffold_12
Class: Halobacteria (75.95%)
79 72368 bp 63.16 47.01 78.43
qs_6_scaffold_270 78 77854 bp 55.48 11.71 77.68
qs_6_scaffold_275 78 85996 bp 54.67 11.37 71.88
qs_6_scaffold_328 78 72515 bp 55.79 11.31 80.27
qs_6_scaffold_45
Class: Halobacteria (66.23%)
77 75315 bp 54.74 18.71 81.62
qs_6_scaffold_166 76 76537 bp 56.44 11.01 80.92
Displaying items 1-50 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.