ggKbase home page

qs_6_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 154 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_5_1
unknown

Not on your lists

1..144
DNA (144bp) protein (48aa)

This feature has no annotations

qs_6_scaffold_5_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

345..851
DNA (507bp) protein (169aa)
hypothetical protein id=24655546 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88992.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qs_6_scaffold_5_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(936..1667)
DNA (732bp) protein (244aa)
Transcriptional regulator, MarR family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P323_HALMD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV47495.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
qs_6_scaffold_5_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1728..2366)
DNA (639bp) protein (213aa)
FG-GAP repeat-containing protein, possibly sugar-related id=24646018 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10235.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
glycoside hydrolase family 10
qs_6_scaffold_5_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2400..3932)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W4Z4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01422.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_6_scaffold_5_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4490..5680
DNA (1191bp) protein (397aa)
Metallophosphoesterase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP71_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELZ25016.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DNA double-strand break repair protein Mre11
qs_6_scaffold_5_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5677..8475
DNA (2799bp) protein (933aa)
chromosome segregation protein; K03546 exonuclease SbcC id=24647340 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
chromosome segregation protein
qs_6_scaffold_5_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8806..9153
DNA (348bp) protein (116aa)
DNA-binding protein J07HX64_02569 n=1 Tax=halophilic archaeon J07HX64 RepID=U1P297_9EURY
DNA-binding protein J07HX64_02569 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_5_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9153..9743
DNA (591bp) protein (197aa)
hypothetical protein; K07585 hypothetical protein id=24655508 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative PP-loop ATPase {ECO:0000313|EMBL:ERG88966.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
putative subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
qs_6_scaffold_5_10
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9900..10577
DNA (678bp) protein (226aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1};; UMP pyrophosphorylase {ECO:
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRI3_9EURY
qs_6_scaffold_5_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10650..11282)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26045.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qs_6_scaffold_5_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11292..12515)
DNA (1224bp) protein (408aa)
HTR-like protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAN5_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ80792.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
histidine kinase
qs_6_scaffold_5_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12561..13064)
DNA (504bp) protein (168aa)
ACT domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISU2_NATPD
hypothetical protein
ACT domain protein {ECO:0000313|EMBL:CAI48793.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_6_scaffold_5_14
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13128..14486
DNA (1359bp) protein (453aa)
Integrase family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EHG6_9EURY
Integrase family protein {ECO:0000313|EMBL:ELZ47221.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM
integrase family protein
qs_6_scaffold_5_15
unknown

Not on your lists

comp(14417..14581)
DNA (165bp) protein (55aa)

This feature has no annotations

qs_6_scaffold_5_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15529..16722)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA17174.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qs_6_scaffold_5_17
unknown

Not on your lists

comp(16756..17091)
DNA (336bp) protein (112aa)

This feature has no annotations

qs_6_scaffold_5_18
unknown

Not on your lists

comp(17854..18183)
DNA (330bp) protein (110aa)

This feature has no annotations

qs_6_scaffold_5_19
unknown

Not on your lists

18273..19481
DNA (1209bp) protein (403aa)

This feature has no annotations

qs_6_scaffold_5_20
unknown

Not on your lists

19493..19789
DNA (297bp) protein (99aa)

This feature has no annotations

qs_6_scaffold_5_21
unknown

Not on your lists

19837..20097
DNA (261bp) protein (87aa)

This feature has no annotations

qs_6_scaffold_5_22
unknown

Not on your lists

20090..20275
DNA (186bp) protein (62aa)

This feature has no annotations

qs_6_scaffold_5_23
unknown

Not on your lists

20256..20471
DNA (216bp) protein (72aa)

This feature has no annotations

qs_6_scaffold_5_24
unknown

Not on your lists

20468..20698
DNA (231bp) protein (77aa)

This feature has no annotations

qs_6_scaffold_5_25
unknown

Not on your lists

20701..20916
DNA (216bp) protein (72aa)

This feature has no annotations

qs_6_scaffold_5_26
unknown

Not on your lists

21022..21363
DNA (342bp) protein (114aa)

This feature has no annotations

qs_6_scaffold_5_27
unknown

Not on your lists

21356..21796
DNA (441bp) protein (147aa)

This feature has no annotations

qs_6_scaffold_5_28
unknown

Not on your lists

21796..22254
DNA (459bp) protein (153aa)

This feature has no annotations

qs_6_scaffold_5_29
unknown

Not on your lists

22388..22708
DNA (321bp) protein (107aa)

This feature has no annotations

qs_6_scaffold_5_30
unknown

Not on your lists

22761..23231
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying items 1-30 of 154 in total

View Taxonomy