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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 51-100 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_6_scaffold_10
Class: Halobacteria (84.21%)
76 82677 bp 66.50 21.59 86.45
qs_6_scaffold_112 75 74580 bp 55.99 11.33 80.38
qs_6_scaffold_164
Class: Halobacteria (81.33%)
75 85518 bp 66.87 49.50 87.38
qs_6_scaffold_241
Class: Halobacteria (78.38%)
74 77030 bp 55.27 14.74 81.59
qs_6_scaffold_69 74 78021 bp 55.16 11.90 77.07
qs_6_scaffold_104 74 51088 bp 64.39 19.45 90.73
qs_6_scaffold_201 72 67389 bp 54.35 11.64 80.01
qs_6_scaffold_231 71 72206 bp 55.19 11.68 77.35
qs_6_scaffold_29
Species: Haloarcula vallismortis (52.11%)
71 72886 bp 56.58 25.54 87.80
qs_6_scaffold_43 70 62229 bp 54.18 11.92 75.48
qs_6_scaffold_313 70 64909 bp 54.52 11.76 64.01
qs_6_scaffold_11
Order: Halobacteriales (58.82%)
68 74066 bp 67.19 22.14 85.32
qs_6_scaffold_62 68 58854 bp 53.30 11.84 69.01
qs_6_scaffold_49 68 50375 bp 60.02 72.57 92.30
qs_6_scaffold_33 68 92460 bp 54.53 11.66 74.69
qs_6_scaffold_292 68 62867 bp 56.25 11.27 81.65
qs_6_scaffold_88 66 56697 bp 61.42 11.00 87.22
qs_6_scaffold_138 65 77356 bp 56.34 11.32 82.45
qs_6_scaffold_27 64 66497 bp 56.04 12.00 76.42
qs_6_scaffold_261
Class: Halobacteria (65.63%)
64 49209 bp 53.94 25.24 76.47
qs_6_scaffold_156 64 59206 bp 59.11 10.90 74.67
qs_6_scaffold_55 64 69649 bp 56.07 11.61 82.85
qs_6_scaffold_320
Order: Halobacteriales (68.25%)
63 48067 bp 62.68 35.98 82.41
qs_6_scaffold_498 63 59526 bp 55.24 11.13 76.32
qs_6_scaffold_102
Class: Halobacteria (68.25%)
63 69779 bp 58.90 23.29 82.65
qs_6_scaffold_54
Class: Halobacteria (82.54%)
63 71280 bp 57.93 22.83 86.19
qs_6_scaffold_199 63 55356 bp 53.36 12.01 76.00
qs_6_scaffold_311 62 66422 bp 54.79 11.72 73.12
qs_6_scaffold_461 62 57171 bp 54.61 11.95 78.10
qs_6_scaffold_80 60 69884 bp 55.91 11.46 78.42
qs_6_scaffold_806 59 46702 bp 60.55 10.83 87.39
qs_6_scaffold_154 59 53633 bp 56.61 11.24 81.99
qs_6_scaffold_178 59 41118 bp 64.03 23.55 90.06
qs_6_scaffold_528 56 59443 bp 54.15 12.00 65.97
qs_6_scaffold_17 56 73396 bp 55.22 11.45 74.97
qs_6_scaffold_115 56 52836 bp 56.27 11.72 79.28
qs_6_scaffold_97 56 57868 bp 54.42 11.84 80.22
qs_6_scaffold_136 56 56372 bp 55.94 11.73 75.80
qs_6_scaffold_133 55 54967 bp 55.20 11.07 71.56
qs_6_scaffold_53 55 68772 bp 57.54 11.60 77.15
qs_6_scaffold_76
Class: Halobacteria (79.63%)
54 65423 bp 60.11 46.79 77.93
qs_6_scaffold_198 54 73144 bp 54.09 11.64 78.57
qs_6_scaffold_447 54 57969 bp 55.46 11.38 80.00
qs_6_scaffold_403 54 60965 bp 55.32 11.74 74.01
qs_6_scaffold_25 53 62915 bp 55.39 11.19 73.92
qs_6_scaffold_398 53 48847 bp 55.16 11.52 76.11
qs_6_scaffold_157 52 34066 bp 64.82 67.23 90.82
qs_6_scaffold_246 52 46801 bp 55.98 11.65 81.59
qs_6_scaffold_367
Phylum: Euryarchaeota (50%)
52 54878 bp 64.64 27.54 88.36
qs_6_scaffold_167 51 42404 bp 54.86 11.32 70.27
Displaying items 51-100 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.