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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 101-150 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_6_scaffold_302 51 62784 bp 54.71 11.54 80.89
qs_6_scaffold_134
Class: Halobacteria (72.55%)
51 44867 bp 57.63 12.97 85.10
qs_6_scaffold_82
Class: Halobacteria (54.9%)
51 57426 bp 63.22 20.23 87.07
qs_6_scaffold_475 50 46681 bp 54.42 11.35 68.19
qs_6_scaffold_377 50 47586 bp 52.76 12.16 63.63
qs_6_scaffold_235 50 49866 bp 56.26 11.21 78.82
qs_6_scaffold_369 49 47360 bp 54.43 11.43 73.73
qs_6_scaffold_145
Class: Halobacteria (85.71%)
49 56214 bp 58.28 37.45 91.31
qs_6_scaffold_359
Class: Halobacteria (81.63%)
49 53932 bp 62.61 26.43 81.40
qs_6_scaffold_98 49 57342 bp 55.12 11.50 70.92
qs_6_scaffold_114 48 52313 bp 56.68 11.50 76.71
qs_6_scaffold_360 48 42183 bp 55.47 11.22 75.79
qs_6_scaffold_905 48 32689 bp 63.65 33.16 93.14
qs_6_scaffold_185 48 48087 bp 54.90 11.95 73.93
qs_6_scaffold_521 47 44101 bp 55.01 11.21 70.91
qs_6_scaffold_469 47 56644 bp 55.59 12.43 72.04
qs_6_scaffold_132 47 39898 bp 56.26 11.55 81.24
qs_6_scaffold_71
Class: Halobacteria (73.91%)
46 49155 bp 67.21 21.18 82.31
qs_6_scaffold_189 46 49360 bp 55.21 11.38 67.63
qs_6_scaffold_266 46 55184 bp 53.06 11.84 62.55
qs_6_scaffold_238
Class: Halobacteria (88.89%)
45 51442 bp 66.77 28.85 84.11
qs_6_scaffold_74 45 51080 bp 53.68 11.56 74.40
qs_6_scaffold_318 45 41935 bp 55.26 11.26 77.07
qs_6_scaffold_183 45 34124 bp 57.38 11.13 77.12
qs_6_scaffold_304 44 40973 bp 55.65 11.08 78.75
qs_6_scaffold_428 44 50449 bp 55.29 11.71 69.87
qs_6_scaffold_485 43 47957 bp 56.78 11.38 74.81
qs_6_scaffold_90 43 41816 bp 54.18 12.06 67.45
qs_6_scaffold_111
Class: Halobacteria (76.74%)
43 42405 bp 62.47 39.35 83.59
qs_6_scaffold_242
Class: Halobacteria (88.1%)
42 47370 bp 61.89 17.07 77.86
qs_6_scaffold_150 42 38969 bp 55.82 11.46 78.86
qs_6_scaffold_368 41 45793 bp 53.98 11.64 69.13
qs_6_scaffold_284 41 35727 bp 56.01 11.13 76.05
qs_6_scaffold_324 41 37649 bp 53.88 11.70 74.66
qs_6_scaffold_140
Class: Halobacteria (65.85%)
41 35990 bp 58.80 25.70 83.55
qs_6_scaffold_101
Order: Halobacteriales (63.41%)
41 41302 bp 56.43 19.45 92.05
qs_6_scaffold_260 40 40903 bp 55.62 11.36 72.37
qs_6_scaffold_188 40 36417 bp 56.15 12.15 86.40
qs_6_scaffold_484 40 32056 bp 54.28 11.44 69.44
qs_6_scaffold_129
Class: Halobacteria (60%)
40 44980 bp 59.27 17.26 78.49
qs_6_scaffold_148 40 38589 bp 54.07 11.25 73.73
qs_6_scaffold_179
Domain: Archaea (66.67%)
39 31727 bp 53.97 30.10 72.45
qs_6_scaffold_210 39 42903 bp 55.08 11.43 76.99
qs_6_scaffold_343 39 42711 bp 55.39 12.11 77.09
qs_6_scaffold_512 39 35873 bp 54.90 11.24 74.96
qs_6_scaffold_890 38 37042 bp 54.88 11.69 70.14
qs_6_scaffold_121
Order: Halobacteriales (63.16%)
38 43458 bp 63.55 22.10 82.52
qs_6_scaffold_600
Order: Halobacteriales (50%)
38 40097 bp 63.01 23.92 87.52
qs_6_scaffold_168
Class: Halobacteria (71.05%)
38 35563 bp 53.48 14.95 91.86
qs_6_scaffold_635
Class: Halobacteria (55.26%)
38 33780 bp 65.69 14.31 90.12
Displaying items 101-150 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.