ggKbase home page

qs_6_scaffold_600

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_600_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

323..1183
DNA (861bp) protein (287aa)
Protein-export membrane protein SecF n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CUP0_9EURY
secF; preprotein translocase subunit SecF (TC 3.A.5.1.1)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
qs_6_scaffold_600_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1180..2709
DNA (1530bp) protein (510aa)
Protein-export membrane protein SecD n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM19_9EURY
secD; preprotein translocase subunit SecD
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
qs_6_scaffold_600_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2726..3469)
DNA (744bp) protein (248aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=797114 species="Archaea; Euryarchaeota; Ha
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4R7_9EURY
qs_6_scaffold_600_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4052..7744
DNA (3693bp) protein (1231aa)
Fibronectin type III domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMC3_HALUD
Fibronectin type III domain protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ACV12562.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
qs_6_scaffold_600_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7817..9145)
DNA (1329bp) protein (443aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=797114 s
tRNA pseudouridine synthase Pus10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2K2_9EURY
pseudouridylate synthase
qs_6_scaffold_600_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9271..10626
DNA (1356bp) protein (452aa)
Peptidase M28 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS0_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA43143.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
putative aminopeptidase
qs_6_scaffold_600_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10877..11119)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000378FFED
Uncharacterized protein {ECO:0000313|EMBL:EMA48695.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_6_scaffold_600_8

Not on your lists

11148..11951
DNA (804bp) protein (268aa)
Abortive infection protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ64_9ARCH
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AEN07833.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_600_9
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12048..12983
DNA (936bp) protein (312aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXN1_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKH29910.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
hypothetical protein
qs_6_scaffold_600_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13168..14838
DNA (1671bp) protein (557aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSB7_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EFW92886.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
type I phosphodiesterase/nucleotide pyrophosphatase
qs_6_scaffold_600_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14840..15898
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ3 RepID=UPI0003659563
Glycosyltransferase {ECO:0000313|EMBL:EWC60394.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;
hypothetical protein
qs_6_scaffold_600_12
unknown

Not on your lists

15974..16291
DNA (318bp) protein (106aa)

This feature has no annotations

qs_6_scaffold_600_13
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16407..18044
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FQD0_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD40157.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospiril
qs_6_scaffold_600_14
unknown

Not on your lists

18081..18251
DNA (171bp) protein (57aa)

This feature has no annotations

qs_6_scaffold_600_15
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18435..19979
DNA (1545bp) protein (515aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU72_HALUD
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACV12317.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source=
qs_6_scaffold_600_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20005..20745
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J3Q5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP90012.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_600_17
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21081..22877
DNA (1797bp) protein (599aa)
ABC transporter ATP-binding protein n=2 Tax=Haloarcula hispanica RepID=G0HPX9_HALHT
multidrug ABC transporter permease rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:AJF26837.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. C
qs_6_scaffold_600_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22884..23810)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QZN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90157.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_6_scaffold_600_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23803..24516)
DNA (714bp) protein (238aa)
Methyltransferase FkbM family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8C2_HALXS
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:AEH36952.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
qs_6_scaffold_600_20
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24914..25354)
DNA (441bp) protein (147aa)
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase {ECO:0000313|EMBL:CQR48748.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
qs_6_scaffold_600_21
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25620..26561
DNA (942bp) protein (314aa)
Glycosyl transferase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAL0_HALMT
wcaA; glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AFK21270.1}; Glycosyl transferase family 2 {ECO:0000313|EMBL:AHZ24631.1}; Glycosyl transferase family protein {ECO:0000313|EMBL:ELZ97398.1}; TaxID=523841 species
qs_6_scaffold_600_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26591..27709)
DNA (1119bp) protein (373aa)
Hexosyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J3T3_9EURY
Hexosyltransferase {ECO:0000313|EMBL:ESP90037.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
gth7; glycosyltransferase, type 1
qs_6_scaffold_600_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27761..28741)
DNA (981bp) protein (327aa)
Glycosyl transferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5T6_9EURY
Glycosyl transferase {ECO:0000313|EMBL:EMA41046.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.
family 2 glycosyl transferase
qs_6_scaffold_600_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28843..29988
DNA (1146bp) protein (382aa)
Glycosyltransferase id=1941560 bin=GWD2_RBX1-related_39_127 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glycosyl transferase, group 1 Tax=GWF2_RBX1_38_17_curated
glycosyl transferase
qs_6_scaffold_600_25
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30219..30512
DNA (294bp) protein (98aa)
CopG family transcriptional regulator n=1 Tax=Halarchaeum acidiphilum RepID=UPI00037374FA
Uncharacterized protein {ECO:0000313|EMBL:ELY63403.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_6_scaffold_600_26
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30502..30792
DNA (291bp) protein (97aa)
RelE/StbE replicon stabilization toxin n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A702_9EURY
RelE/StbE replicon stabilization toxin {ECO:0000313|EMBL:GAD53434.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
toxin-like protein
qs_6_scaffold_600_27
unknown

Not on your lists

comp(30963..31220)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_6_scaffold_600_28
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31356..31685)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X1L4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY55659.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_6_scaffold_600_29
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31689..32006)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X4G2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY55478.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qs_6_scaffold_600_30
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32160..32588)
DNA (429bp) protein (143aa)
Sulfatase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HW46_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ87907.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
arylsulfatase A family protein
Displaying items 1-30 of 38 in total

View Taxonomy