ggKbase home page

qs_6_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_188_1
Jatropha curcas, Jatropha, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

2..1108
DNA (1107bp) protein (369aa)
AT4g00830/A_TM018A10_14 n=1 Tax=Arabidopsis thaliana RepID=Q9ASP6_ARATH
Uncharacterized protein {ECO:0000313|EMBL:KDP28426.1}; TaxID=180498 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae
RNP-1 like RNA-binding protein
qs_6_scaffold_188_2
Astyanax mexicanus, Astyanax, Characiformes, Neopterygii, Chordata, Metazoa

Not on your lists

1261..2556
DNA (1296bp) protein (432aa)
Chromosome 5 SCAF15026, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RKR0_TETNG
Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000007765}; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariop
hypothetical protein
qs_6_scaffold_188_3
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

2523..3167
DNA (645bp) protein (215aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FHR3_MICSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO70146.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
qs_6_scaffold_188_4
unknown

Not on your lists

comp(3064..3267)
DNA (204bp) protein (68aa)

This feature has no annotations

qs_6_scaffold_188_5
unknown

Not on your lists

comp(3838..4062)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_6_scaffold_188_6
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(4100..5131)
DNA (1032bp) protein (344aa)
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MUM4_MICPC
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EEH56653.1}; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromona
qs_6_scaffold_188_7
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(5560..5904)
DNA (345bp) protein (115aa)
DHX37 protein; K14780 ATP-dependent RNA helicase DHX37/DHR1 [EC:3.6.4.13]
P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z4L4_9CHLO
P-loop containing nucleoside triphosphate hydrolase protein {ECO:0000313|EMBL:EIE25583.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" so
qs_6_scaffold_188_8
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(6140..8185)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4MI97_THESL
Uncharacterized protein {ECO:0000313|EMBL:KJB09424.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
HrpA-like helicase
qs_6_scaffold_188_9
unknown

Not on your lists

8499..8723
DNA (225bp) protein (75aa)

This feature has no annotations

qs_6_scaffold_188_10
unknown

Not on your lists

8781..10049
DNA (1269bp) protein (423aa)

This feature has no annotations

qs_6_scaffold_188_11
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

10197..11105
DNA (909bp) protein (303aa)
S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0ZAP6_9CHLO
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EIE27715.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Co
protein arginine N-methyltransferase
qs_6_scaffold_188_12
unknown

Not on your lists

11102..11332
DNA (231bp) protein (77aa)

This feature has no annotations

qs_6_scaffold_188_13
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

11474..11956
DNA (483bp) protein (161aa)
Arginine N-methyltransferase (ISS); K11438 protein arginine N-methyltransferase 7 [EC:2.1.1.-]
Arginine N-methyltransferase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016A3_OSTTA
Ribosomal L11 methyltransferase, PrmA {ECO:0000313|EMBL:CEF98548.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococc
qs_6_scaffold_188_14
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

12007..12246
DNA (240bp) protein (80aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EFN56015.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorel
qs_6_scaffold_188_15
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12334..13035
DNA (702bp) protein (234aa)
Transcriptional activator, TenA family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWQ9_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KFI29352.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
Transcriptional activator, TenA family protein
qs_6_scaffold_188_16
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

13025..15796
DNA (2772bp) protein (924aa)
rRNA processing protein Rrp5 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q010S4_OSTTA
Uncharacterized protein {ECO:0000313|EMBL:ACO65598.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
hypothetical protein
qs_6_scaffold_188_17
unknown

Not on your lists

15829..16284
DNA (456bp) protein (152aa)

This feature has no annotations

qs_6_scaffold_188_18
unknown

Not on your lists

comp(16281..16409)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_6_scaffold_188_19
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

16445..17452
DNA (1008bp) protein (336aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1ECK5_MICSR
RRP5-1; hypothetical protein; K14792 rRNA biogenesis protein RRP5
Uncharacterized protein {ECO:0000313|EMBL:ACO65598.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
qs_6_scaffold_188_20
Citrus clementina, Citrus, Sapindales, rosids, Streptophyta, Viridiplantae

Not on your lists

17656..19128
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Citrus clementina RepID=V4SR80_9ROSI
Uncharacterized protein {ECO:0000313|EMBL:ESR43192.1}; TaxID=85681 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
hypothetical protein; K14792 rRNA biogenesis protein RRP5
qs_6_scaffold_188_21
Oryza sativa, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

19149..20606
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Oryza glaberrima RepID=I1QMA5_ORYGL
Os09g0249600; Similar to small nuclear ribonucleoprotein family protein / snRNP family protein.
Os09g0249600 protein {ECO:0000313|EMBL:BAF24587.1}; Putative U4/U6-associated RNA splicing factor {ECO:0000313|EMBL:BAD19909.1}; TaxID=39947 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyt
qs_6_scaffold_188_22
unknown

Not on your lists

comp(20993..21118)
DNA (126bp) protein (42aa)

This feature has no annotations

qs_6_scaffold_188_23
unknown

Not on your lists

comp(21234..21560)
DNA (327bp) protein (109aa)

This feature has no annotations

qs_6_scaffold_188_24
unknown

Not on your lists

21732..21908
DNA (177bp) protein (59aa)

This feature has no annotations

qs_6_scaffold_188_25
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(22009..24084)
DNA (2076bp) protein (692aa)
COG0714: MoxR-like ATPases (ISS) n=1 Tax=Ostreococcus tauri RepID=Q010W4_OSTTA
P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:CEF99218.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccace
ATPase
qs_6_scaffold_188_26
unknown

Not on your lists

comp(24044..24523)
DNA (480bp) protein (160aa)

This feature has no annotations

qs_6_scaffold_188_27
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

24785..25297
DNA (513bp) protein (171aa)
Transposon protein, putative, Pong sub-class n=1 Tax=Oryza sativa subsp. japonica RepID=Q2QP27_ORYSJ
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo6g077090.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons;
qs_6_scaffold_188_28
unknown

Not on your lists

25695..26360
DNA (666bp) protein (222aa)

This feature has no annotations

qs_6_scaffold_188_29
Triticum aestivum, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(26407..27447)
DNA (1041bp) protein (347aa)
Ankyrin repeat domain-containing protein 2 n=1 Tax=Triticum urartu RepID=M7Z025_TRIUA
Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_7DS_A43F67578.1}; TaxID=4565 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsi
ank2; ankyrin repeat-containing protein
qs_6_scaffold_188_30
unknown

Not on your lists

27545..28129
DNA (585bp) protein (195aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

View Taxonomy