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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_6_scaffold_11047
Species: Haladaptatus paucihalophilus (75%)
4 3092 bp 68.01 7.99 100.42
qs_6_scaffold_7450
Domain: Bacteria (66.67%)
3 1903 bp 69.78 94.75 100.42
qs_6_scaffold_11823
Species: Natronomonas moolapensis (50%)
2 1428 bp 71.15 29.13 100.42
qs_6_scaffold_11737
Genus: Natronomonas (66.67%)
3 1434 bp 72.25 29.78 100.42
qs_6_scaffold_20913
Species: Halopiger xanaduensis (66.67%)
3 1939 bp 75.24 9.13 100.41
qs_6_scaffold_21871
Species: halophilic archaeon DL31 (50%)
2 1455 bp 68.80 10.58 100.41
qs_6_scaffold_7207
Genus: Natronomonas (50%)
4 1942 bp 74.25 19.31 100.41
qs_6_scaffold_5863
Species: Halomicrobium mukohataei (50%)
2 2211 bp 73.68 52.06 100.41
qs_6_scaffold_11166
Species: Haloferax volcanii (50%)
2 1479 bp 58.22 8.45 100.41
qs_6_scaffold_10973
Species: Cyanothece sp. PCC 7425 (50%)
2 1497 bp 57.78 11.29 100.40
qs_6_scaffold_25261
Species: Salinibacter ruber (50%)
2 1497 bp 67.47 47.67 100.40
qs_6_scaffold_14495
Species: RBG_16_Chloroflexi_68_14_curated (50%)
2 1249 bp 65.89 16.17 100.40
qs_6_scaffold_19919
Species: Haloferax mucosum (50%)
2 1001 bp 68.43 11.19 100.40
qs_6_scaffold_13670
Species: Luminiphilus syltensis (50%)
2 1769 bp 67.16 8.25 100.40
qs_6_scaffold_2739
Species: Natronomonas moolapensis (54.55%)
11 4076 bp 67.37 120.88 100.39
qs_6_scaffold_28107
Species: Halococcus hamelinensis (100%)
3 2038 bp 59.03 5.10 100.39
qs_6_scaffold_18589
Species: Halobacterium salinarum (100%)
2 1052 bp 62.74 40.02 100.38
qs_6_scaffold_7608
Order: Natrialbales (66.67%)
3 2370 bp 75.70 46.79 100.38
qs_6_scaffold_29363 3 1321 bp 68.05 9.24 100.38
qs_6_scaffold_18353
Species: GWA2_Berkelbacteria_38_9 (50%)
2 1061 bp 58.06 4.90 100.38
qs_6_scaffold_15418
Species: Natronomonas moolapensis (66.67%)
3 1599 bp 72.98 48.22 100.37
qs_6_scaffold_13008
Species: Natrinema gari (50%)
2 1342 bp 66.84 5.29 100.37
qs_6_scaffold_18377
Species: Natronomonas pharaonis (100%)
2 1883 bp 73.39 44.56 100.37
qs_6_scaffold_7419
Species: Haloferax larsenii (50%)
2 1907 bp 72.84 41.27 100.37
qs_6_scaffold_12608
Species: Natrialba asiatica (100%)
2 1369 bp 60.99 42.66 100.37
qs_6_scaffold_9282
Species: Natronomonas pharaonis (100%)
2 1659 bp 63.53 15.85 100.36
qs_6_scaffold_17201
Species: Halobacterium sp. DL1 (50%)
2 1109 bp 73.76 11.00 100.36
qs_6_scaffold_4737
Species: Natrialba hulunbeirensis (66.67%)
3 2532 bp 56.71 7.50 100.35
qs_6_scaffold_12028
Species: Natronomonas pharaonis (100%)
2 1411 bp 74.49 42.66 100.35
qs_6_scaffold_11846
Species: Halosimplex carlsbadense (50%)
2 1426 bp 72.44 17.88 100.35
qs_6_scaffold_8810
Species: Halorubrum coriense (50%)
2 1713 bp 60.54 8.23 100.35
qs_6_scaffold_11793
Class: Halobacteria (66.67%)
3 1429 bp 68.72 98.81 100.35
qs_6_scaffold_16445
Species: Halococcus salifodinae (100%)
2 1145 bp 67.51 25.41 100.35
qs_6_scaffold_3409
Class: Halobacteria (66.67%)
3 3169 bp 48.94 6.66 100.35
qs_6_scaffold_11521 3 1450 bp 66.07 22.34 100.35
qs_6_scaffold_13340
Species: Haloferax larsenii (100%)
2 2039 bp 68.71 33.15 100.34
qs_6_scaffold_8527
Class: Halobacteria (100%)
3 1749 bp 65.35 10.75 100.34
qs_6_scaffold_9021
Species: Halorubrum sp. J07HR59 (66.67%)
3 2051 bp 67.58 63.77 100.34
qs_6_scaffold_15780
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1178 bp 47.88 5.09 100.34
qs_6_scaffold_6483
Species: Halococcus thailandensis (100%)
3 2066 bp 62.78 13.46 100.34
qs_6_scaffold_15685
Species: Rhodothermus marinus (50%)
2 1184 bp 60.73 4.73 100.34
qs_6_scaffold_10752
Species: Calothrix parietina (50%)
2 1516 bp 57.06 14.12 100.33
qs_6_scaffold_10760
Species: Halococcus saccharolyticus (66.67%)
3 1516 bp 58.71 12.93 100.33
qs_6_scaffold_10765
Order: Natrialbales (66.67%)
3 1516 bp 61.68 6.00 100.33
qs_6_scaffold_15114
Species: Halococcus saccharolyticus (100%)
2 1214 bp 70.76 9.39 100.33
qs_6_scaffold_31458
Species: Haloferax sulfurifontis (50%)
2 1214 bp 72.24 9.06 100.33
qs_6_scaffold_10648
Domain: Bacteria (66.67%)
3 1525 bp 49.51 6.36 100.33
qs_6_scaffold_7893
Species: Halogeometricum pallidum (50%)
2 1836 bp 70.37 50.27 100.33
qs_6_scaffold_7896
Species: Alcanivorax dieselolei (50%)
2 1836 bp 70.15 63.45 100.33
qs_6_scaffold_14904
Species: Halovivax asiaticus (50%)
2 1226 bp 71.13 10.52 100.33
Displaying items 301-350 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.