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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_6_scaffold_14907
Species: Halopiger xanaduensis (50%)
2 1226 bp 63.95 8.89 100.33
qs_6_scaffold_11119
Class: Halobacteria (66.67%)
3 2171 bp 54.44 7.83 100.32
qs_6_scaffold_14088
Species: Haloarcula hispanica (50%)
2 1274 bp 70.80 9.26 100.31
qs_6_scaffold_4700
Genus: Halococcus (75%)
4 2548 bp 70.25 16.80 100.31
qs_6_scaffold_3750
Species: Candidatus Halobonum tyrrellensis (50%)
4 3517 bp 71.37 9.73 100.31
qs_6_scaffold_4406
Species: Natronomonas moolapensis (66.67%)
3 3230 bp 65.98 31.05 100.31
qs_6_scaffold_14076 2 1627 bp 69.82 7.87 100.31
qs_6_scaffold_20183
Species: Halobacterium sp. DL1 (50%)
2 1630 bp 65.89 31.85 100.31
qs_6_scaffold_5595
Order: Haloferacales (66.67%)
3 2282 bp 63.28 6.35 100.31
qs_6_scaffold_6491
Order: Halobacteriales (66.67%)
3 3263 bp 66.69 29.54 100.31
qs_6_scaffold_13571
Class: Halobacteria (66.67%)
3 1307 bp 69.93 45.91 100.31
qs_6_scaffold_13399
Species: Halococcus saccharolyticus (50%)
2 1316 bp 64.21 7.22 100.30
qs_6_scaffold_13318
Species: Halorubrum coriense (50%)
2 1322 bp 70.27 17.62 100.30
qs_6_scaffold_13120
Species: uncultured archaeon A07HR60 (50%)
2 1334 bp 65.59 85.53 100.30
qs_6_scaffold_13046
Species: Salinibacter ruber (50%)
2 1340 bp 66.49 8.96 100.30
qs_6_scaffold_12948
Species: Halococcus saccharolyticus (100%)
2 1346 bp 58.84 7.80 100.30
qs_6_scaffold_12949
Species: Halorubrum californiense (50%)
2 1346 bp 62.70 18.20 100.30
qs_6_scaffold_8957
Species: Haloarcula argentinensis (100%)
3 1696 bp 68.69 6.49 100.30
qs_6_scaffold_3573
Species: Halarchaeum acidiphilum (100%)
3 3063 bp 53.84 7.12 100.29
qs_6_scaffold_12642
Species: Haladaptatus paucihalophilus (50%)
2 1367 bp 73.37 8.85 100.29
qs_6_scaffold_3123
Order: Halobacteriales (66.67%)
3 4104 bp 78.44 76.68 100.29
qs_6_scaffold_5952
Order: Haloferacales (100%)
3 2749 bp 63.22 7.24 100.29
qs_6_scaffold_6769
Species: Rhodothermus marinus (50%)
2 2411 bp 68.81 46.16 100.29
qs_6_scaffold_14867
Species: Salinibacter ruber (66.67%)
3 2070 bp 64.59 68.99 100.29
qs_6_scaffold_19054
Species: Halococcus saccharolyticus (50%)
2 1035 bp 74.11 8.12 100.29
qs_6_scaffold_16194
Class: Actinobacteria (50%)
4 1729 bp 72.64 8.62 100.29
qs_6_scaffold_18872
Species: Haloterrigena limicola (50%)
2 1041 bp 65.32 8.26 100.29
qs_6_scaffold_18875
Species: Natronomonas moolapensis (50%)
2 1041 bp 74.26 51.30 100.29
qs_6_scaffold_18785
Species: Natronomonas moolapensis (50%)
2 1044 bp 74.23 88.79 100.29
qs_6_scaffold_18794
Species: Natronomonas pharaonis (66.67%)
3 1044 bp 68.68 28.74 100.29
qs_6_scaffold_18712
Species: Natronomonas pharaonis (50%)
2 1047 bp 68.67 21.49 100.29
qs_6_scaffold_18623
Species: Halogranum salarium (100%)
2 1050 bp 70.57 9.05 100.29
qs_6_scaffold_8456
Class: Halobacteria (66.67%)
3 1759 bp 64.92 7.56 100.28
qs_6_scaffold_11917
Species: Natronomonas pharaonis (50%)
2 1421 bp 64.60 55.31 100.28
qs_6_scaffold_21038
Species: Natronomonas pharaonis (100%)
2 1424 bp 70.37 59.20 100.28
qs_6_scaffold_18105
Species: halophilic archaeon J07HB67 (50%)
2 1071 bp 66.48 25.49 100.28
qs_6_scaffold_17742
Species: Halococcus hamelinensis (50%)
2 1086 bp 52.12 4.05 100.28
qs_6_scaffold_33381
Species: Salinibacter ruber (100%)
2 1086 bp 69.89 68.32 100.28
qs_6_scaffold_17601
Species: halophilic archaeon J07HB67 (50%)
2 1092 bp 67.03 67.31 100.28
qs_6_scaffold_17260 2 1107 bp 66.49 7.59 100.27
qs_6_scaffold_11077
Species: Halorubrum saccharovorum (66.67%)
3 1487 bp 73.50 64.90 100.27
qs_6_scaffold_17041
Species: Solanum tuberosum (50%)
2 1116 bp 65.95 8.87 100.27
qs_6_scaffold_11008
Species: Salinibacter ruber (50%)
2 1493 bp 63.90 54.19 100.27
qs_6_scaffold_4488
Species: Natronomonas pharaonis (50%)
4 2633 bp 69.54 69.08 100.27
qs_6_scaffold_16725
Species: Modestobacter sp. KNN45-2b (50%)
2 1131 bp 74.89 7.16 100.27
qs_6_scaffold_16486
Species: Halogeometricum pallidum (100%)
2 1143 bp 72.09 8.66 100.26
qs_6_scaffold_16497
Species: Halanaeroarchaeum sulfurireducens (100%)
2 1143 bp 54.59 5.51 100.26
qs_6_scaffold_20465
Species: Halalkalicoccus jeotgali (50%)
2 1532 bp 68.34 6.79 100.26
qs_6_scaffold_10532
Species: Halogeometricum pallidum (100%)
2 1535 bp 65.21 6.19 100.26
qs_6_scaffold_16232
Species: Haloferax elongans (50%)
2 1155 bp 71.00 11.86 100.26
Displaying items 351-400 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.