ggKbase home page

qs_6_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 65 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_20_1
unknown

Not on your lists

1581..1742
DNA (162bp) protein (54aa)

This feature has no annotations

qs_6_scaffold_20_2
unknown

Not on your lists

1782..2063
DNA (282bp) protein (94aa)

This feature has no annotations

qs_6_scaffold_20_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(2074..2352)
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000345C45A
CRISPR-associated endoribonuclease Cas2
qs_6_scaffold_20_4
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2352..3359)
DNA (1008bp) protein (336aa)
CRISPR-associated protein Cas1 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UML5_CYAP2
CRISPR-associated protein Cas1
CRISPR-associated protein Cas1 {ECO:0000313|EMBL:ADN18195.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822
qs_6_scaffold_20_5
unknown

Not on your lists

3474..3758
DNA (285bp) protein (95aa)

This feature has no annotations

qs_6_scaffold_20_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3704..4309)
DNA (606bp) protein (202aa)
CRISPR-associated protein, Cas1 family (EC:2.7.7.49)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G1B8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN56408.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
qs_6_scaffold_20_7
unknown

Not on your lists

comp(4371..4826)
DNA (456bp) protein (152aa)

This feature has no annotations

qs_6_scaffold_20_8
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5188..8190
DNA (3003bp) protein (1001aa)
CRISPR-associated protein, Cmr2 family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAU6_HALP7
CRISPR-associated protein, Cmr2 family {ECO:0000313|EMBL:AFZ43530.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Haloth
CRISPR-associated protein, Cmr2 family
qs_6_scaffold_20_9
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8230..8592
DNA (363bp) protein (121aa)
TIGR02436 family protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3T9_9CYAN
hypothetical protein
TIGR02436 family protein {ECO:0000313|EMBL:AFY77562.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_6_scaffold_20_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8657..9766
DNA (1110bp) protein (370aa)
CRISPR-associated protein, Cmr3 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9A8_HALP7
CRISPR-associated protein, Cmr3
CRISPR-associated protein, Cmr3 {ECO:0000313|EMBL:AFZ43531.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
qs_6_scaffold_20_11
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9763..10656
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZR3_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:EAZ88031.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
hypothetical protein
qs_6_scaffold_20_12
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10659..11195
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1X166_CYAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB49707.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
qs_6_scaffold_20_13
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11195..12931
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZPA9_ANACC
RAMP superfamily protein {ECO:0000313|EMBL:KIE10126.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
hypothetical protein
qs_6_scaffold_20_14
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12991..14460
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00031F724E
Uncharacterized protein {ECO:0000313|EMBL:KEI66716.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126
hypothetical protein
qs_6_scaffold_20_15
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

14701..15582
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00037C2AB3
WD-40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AFZ38170.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).
qs_6_scaffold_20_16
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15852..16469
DNA (618bp) protein (206aa)
Alpha-Rep4 n=1 Tax=synthetic construct RepID=UPI0001E5ECAE
HEAT repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44890.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina v
qs_6_scaffold_20_17
unknown

Not on your lists

16430..16831
DNA (402bp) protein (134aa)

This feature has no annotations

qs_6_scaffold_20_18
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17052..17561)
DNA (510bp) protein (170aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U396_9CYAN
MFS transporter {ECO:0000313|EMBL:KIF19451.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
major facilitator superfamily protein
qs_6_scaffold_20_19
unknown

Not on your lists

17630..17755
DNA (126bp) protein (42aa)

This feature has no annotations

qs_6_scaffold_20_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


comp(17808..20264)
DNA (2457bp) protein (819aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source=
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T574_9CYAN
type IIA topoisomerase subunit A
qs_6_scaffold_20_21
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(20650..21555)
DNA (906bp) protein (302aa)
Tetratricopeptide repeat protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7S4_9CYAN
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFY78049.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_6_scaffold_20_22
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

22029..22607
DNA (579bp) protein (193aa)
Putative HD superfamily hydrolase of NAD metabolism n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6K6_9CYAN
putative HD superfamily hydrolase of NAD metabolism
Putative HD superfamily hydrolase of NAD metabolism {ECO:0000313|EMBL:AFY78160.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_6_scaffold_20_23
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22702..23160
DNA (459bp) protein (153aa)
Ribosomal silencing factor RsfS n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCI5_HALP7
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;
qs_6_scaffold_20_24
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

23181..23690
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003703B3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY78158.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_6_scaffold_20_25
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23749..24702
DNA (954bp) protein (318aa)
L-asparaginase II n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UHH0_CYAP2
L-asparaginase II
L-asparaginase II {ECO:0000313|EMBL:ADN12111.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
qs_6_scaffold_20_trna_1
unknown

Not on your lists

24771..24844
DNA (74bp)
transferRNA
qs_6_scaffold_20_26
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24804..25193)
DNA (390bp) protein (130aa)
Putative transposase n=1 Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JG54_MICAN
transposase
Genome sequencing data, contig C316 {ECO:0000313|EMBL:CAO87412.1}; TaxID=267872 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PC
qs_6_scaffold_20_27
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25500..27398)
DNA (1899bp) protein (633aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YY52_DACSA
glucosamine--fructose-6-phosphate aminotransferase
qs_6_scaffold_20_28
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27680..27925)
DNA (246bp) protein (82aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=9 Tax=Oscillatoriophycideae RepID=PSAC_TRIEI
photosystem I iron-sulfur protein PsaC
qs_6_scaffold_20_29
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28281..28793
DNA (513bp) protein (171aa)
Heat shock protein Hsp20 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLM1_9CHRO
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AFZ32979.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
Displaying items 1-30 of 65 in total

View Taxonomy