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qs_6_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 68 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_253_1
unknown

Not on your lists

comp(1..192)
DNA (192bp) protein (64aa)

This feature has no annotations

qs_6_scaffold_253_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(185..1009)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LST6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56001.1}; Flags: Precursor;; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum la
qs_6_scaffold_253_trna_3
unknown

Not on your lists

comp(1237..1308)
DNA (72bp)
transferRNA
qs_6_scaffold_253_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1372..1851)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HA43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87585.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_253_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1955..2269)
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRA4_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus H
rps10p; 30S ribosomal protein S10P
qs_6_scaffold_253_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2270..3619)
DNA (1350bp) protein (450aa)
Elongation factor 1-alpha n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWM4_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
tef1a1; translation elongation factor aEF-1 subunit alpha
qs_6_scaffold_253_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3709..4683)
DNA (975bp) protein (325aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qs_6_scaffold_253_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4680..5303)
DNA (624bp) protein (208aa)
ACT binding domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFR8_9EURY
ACT binding domain-containing protein {ECO:0000313|EMBL:EJN59461.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
amino acid-binding ACT domain-containing protein
qs_6_scaffold_253_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5719..7869)
DNA (2151bp) protein (717aa)
Elongation factor 2 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HA48_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Haloba
translation elongation factor 2 (ef-2/ef-g)
qs_6_scaffold_253_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8205..8972
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3H2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30056.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_6_scaffold_253_10
unknown

Not on your lists

comp(9121..9450)
DNA (330bp) protein (110aa)

This feature has no annotations

qs_6_scaffold_253_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9547..10278
DNA (732bp) protein (244aa)
hydrolase n=1 Tax=Halorubrum sp. T3 RepID=UPI000365BD44
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ELZ55214.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
HAD-superfamily hydrolase
qs_6_scaffold_253_12

Not on your lists

10275..10949
DNA (675bp) protein (225aa)
Class II aldolase/adducin family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKA1_9ARCH
class II aldolase/adducin family protein rbh
Class II aldolase/adducin family protein {ECO:0000313|EMBL:AEN04698.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_253_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11003..11152
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54776.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_6_scaffold_253_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11244..11861)
DNA (618bp) protein (206aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=24616451 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Ha
rps7P; 30S ribosomal protein S7P
qs_6_scaffold_253_15
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11861..12289)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1G7_HALMT
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sour
qs_6_scaffold_253_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12530..12955)
DNA (426bp) protein (142aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=24616454 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
transcription elongation factor NusA-like protein
qs_6_scaffold_253_17
Halorubrum sp. SP3, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12958..15681)
DNA (2724bp) protein (908aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A n=1 Tax=Halorubrum sp. T3 RepID=UPI000370045C
RNA polymerase A {ECO:0000313|EMBL:AIL25671.1}; TaxID=1537265 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. SP3.;"
qs_6_scaffold_253_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15674..18607)
DNA (2934bp) protein (978aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit a' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRB9_9EURY
qs_6_scaffold_253_19
Halobaculum gomorrense, Halobaculum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18612..20441)
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=43928 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
DNA-directed RNA polymerase subunit b' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halobaculum gomorrense RepID=C5NSC1_9EURY
qs_6_scaffold_253_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20443..22008)
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit beta''; K03045 DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] id=24616458 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ESP87603.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESP87603.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit beta''
qs_6_scaffold_253_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22005..22235)
DNA (231bp) protein (77aa)
RNA polymerase Rpb5; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=24616459 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
RNA polymerase Rpb5
qs_6_scaffold_253_trna_1
unknown

Not on your lists

22526..22598
DNA (73bp)
transferRNA
qs_6_scaffold_253_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22792..23085)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JHY9_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31150.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_6_scaffold_253_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23234..23878)
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DC44_HALXS
bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:AEH37157.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanad
qs_6_scaffold_253_24
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24087..24362)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ANV9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ74912.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qs_6_scaffold_253_25
unknown

Not on your lists

comp(24499..24636)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_6_scaffold_253_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24678..25412)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87607.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_253_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25838..26359
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HC29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87608.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_253_28
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26397..26573)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY66205.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
Displaying items 1-30 of 68 in total

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