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qs_6_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 154 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_39_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..195
DNA (195bp) protein (65aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 id=24616265 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Cytochrome oxidase assembly {ECO:0000313|EMBL:ESP87762.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
qs_6_scaffold_39_2
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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270..1151
DNA (882bp) protein (294aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate glutamine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GSP2_HALVD
glnH; putative glutamine ABC transporter periplasmic substrate-binding protein
ABC-type transport system periplasmic substrate-binding protein (Probable substrate glutamine) {ECO:0000313|EMBL:ADE03666.1}; Putative glutamine ABC transporter periplasmic substrate-binding protein {
qs_6_scaffold_39_3

Not on your lists

1094..1927
DNA (834bp) protein (278aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MNV5_9ARCH
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEN07304.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_39_4

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1927..2655
DNA (729bp) protein (243aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEN07303.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEN07303.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Fe(3+)-transporting ATPase n=1 Tax=halophilic archaeon DL31 RepID=G2MNV4_9ARCH
qs_6_scaffold_39_5
unknown

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2710..3150
DNA (441bp) protein (147aa)

This feature has no annotations

qs_6_scaffold_39_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3247..4305)
DNA (1059bp) protein (353aa)
alcohol dehydrogenase zinc-binding domain-containing protein id=24616266 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:ESP87763.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus H
alcohol dehydrogenase zinc-binding domain-containing protein
qs_6_scaffold_39_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4451..5419)
DNA (969bp) protein (323aa)
G6PDH family F420-dependent oxidoreductase id=24616267 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
G6PDH family F420-dependent oxidoreductase {ECO:0000313|EMBL:ESP87764.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
F420-dependent oxidoreductase, G6PDH family
qs_6_scaffold_39_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5559..7076)
DNA (1518bp) protein (506aa)
Replication factor C large subunit n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HAN2_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
replication factor C large subunit
qs_6_scaffold_39_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7191..8048
DNA (858bp) protein (286aa)
TatD-related deoxyribonuclease n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNA6_9EURY
Deoxyribonuclease {ECO:0000313|EMBL:KKF39532.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
TatD-related deoxyribonuclease
qs_6_scaffold_39_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8249..8830
DNA (582bp) protein (194aa)
hypothetical protein id=24616273 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87770.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_39_11
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8924..10996
DNA (2073bp) protein (691aa)
PKD domain-containing protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ILQ5_9EURY
PKD domain-containing protein {ECO:0000313|EMBL:ELZ96788.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-
PKD domain-containing protein
qs_6_scaffold_39_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11091..12428
DNA (1338bp) protein (446aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10); K01641 hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] id=24616275 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ESP87772.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
qs_6_scaffold_39_13
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

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comp(14163..15455)
DNA (1293bp) protein (431aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
family 2 glycosyl transferase id=5095173 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
family 2 glycosyl transferase
qs_6_scaffold_39_14

Not on your lists

comp(15457..16350)
DNA (894bp) protein (298aa)
Nucleotide sugar dehydrogenase n=1 Tax=Frankia sp. EUN1f RepID=D3DBT5_9ACTO id=136581 bin=ACD8 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EKE19989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nucleotide sugar dehydrogenase
qs_6_scaffold_39_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17155..17985)
DNA (831bp) protein (277aa)
XRE family transcriptional regulator; K07731 putative transcriptional regulator id=24616277 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
XRE family transcriptional regulator {ECO:0000313|EMBL:ESP87774.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Cand
XRE family transcriptional regulator
qs_6_scaffold_39_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18045..18707
DNA (663bp) protein (221aa)
hypothetical protein id=24616278 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87775.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_39_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18794..19333
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHA7_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:AHG04387.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
acetyltransferase
qs_6_scaffold_39_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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19470..19730
DNA (261bp) protein (87aa)
Glutaredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3P7_9EURY
Glutaredoxin {ECO:0000313|EMBL:ELZ30040.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
glutaredoxin
qs_6_scaffold_39_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19934..20923)
DNA (990bp) protein (330aa)
XRE family transcriptional regulator; K07728 putative transcriptional regulator id=24616283 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Putative HTH-type transcriptional regulatory protein K933_12326 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
XRE family transcriptional regulator
qs_6_scaffold_39_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21079..22476
DNA (1398bp) protein (466aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRV1_9EURY
hypothetical protein
qs_6_scaffold_39_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22489..23574)
DNA (1086bp) protein (362aa)
Threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IX82_9EURY
Threonine synthase {ECO:0000313|EMBL:ESP87782.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
qs_6_scaffold_39_22
unknown

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comp(23686..23928)
DNA (243bp) protein (81aa)

This feature has no annotations

qs_6_scaffold_39_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24256..25212)
DNA (957bp) protein (319aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCJ9_9EURY
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ESP87783.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
succinylglutamate desuccinylase/aspartoacylase
qs_6_scaffold_39_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25702..26352
DNA (651bp) protein (217aa)
Xaa-pro aminopeptidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIM8_9EURY
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP87784.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
peptidase M24
qs_6_scaffold_39_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26414..27733
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HAP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87785.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_39_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27882..30155
DNA (2274bp) protein (758aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:ESP87786.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ESP87786.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; H
allosteric nADP-dependent malic enzyme (EC:1.1.1.40)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRV5_9EURY
qs_6_scaffold_39_27

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30310..31929
DNA (1620bp) protein (540aa)
ABC-type transporter, periplasmic subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MFU5_9ARCH
ABC transporter periplasmic protein rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEN04494.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_39_28

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31955..32947
DNA (993bp) protein (331aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MFU6_9ARCH
ABC transporter rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN04495.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_39_29

Not on your lists

32947..33963
DNA (1017bp) protein (339aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MFU7_9ARCH
ABC transporter rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN04496.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_39_30
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33964..35235
DNA (1272bp) protein (424aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXB0_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ESP87792.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sou
Displaying items 1-30 of 154 in total

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