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qs_6_scaffold_72

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Displaying items 1-30 of 145 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_72_trna_1
unknown

Not on your lists

226..301
DNA (76bp)
transferRNA
qs_6_scaffold_72_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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380..1255
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HD41_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87983.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_6_scaffold_72_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1707..2270
DNA (564bp) protein (188aa)
dephospho-CoA kinase id=24616159 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Dephospho-CoA kinase {ECO:0000313|EMBL:ESP87984.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
dephospho-CoA kinase
qs_6_scaffold_72_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2267..2689
DNA (423bp) protein (141aa)
CoaE operon protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBA7_9EURY
UPF0201 protein K933_11741 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
coaE operon protein
qs_6_scaffold_72_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2710..3153)
DNA (444bp) protein (148aa)
Blp-like protein n=2 Tax=Haloquadratum walsbyi RepID=G0LGE5_HALWC
blp; bacterioopsin-linked protein blp
Blp-like protein {ECO:0000313|EMBL:CCC39165.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM 16
qs_6_scaffold_72_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3194..3658)
DNA (465bp) protein (155aa)
hypothetical protein id=24647404 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08552.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_72_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3762..4457
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32119.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
qs_6_scaffold_72_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4474..5031)
DNA (558bp) protein (186aa)
cation transporter; K07244 mgtE-like transporter id=24616163 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
MgtE integral membrane protein {ECO:0000313|EMBL:ESP87988.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
cation transporter
qs_6_scaffold_72_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5032..5625)
DNA (594bp) protein (198aa)
Mg2+ transporter n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJ89_9EURY
Mg2+ transporter {ECO:0000313|EMBL:ESP87989.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyr
mgtE2; Mg2+ transporter
qs_6_scaffold_72_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5793..6785
DNA (993bp) protein (331aa)
surE; 5'-nucleotidase (EC:3.1.3.5) id=24616165 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
surE2; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase {ECO:0000313|EMBL:ESP87990.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrr
qs_6_scaffold_72_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6828..7667)
DNA (840bp) protein (280aa)
Beta-lactamase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Z3_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ28179.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
metal-dependent hydrolase
qs_6_scaffold_72_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7760..9034)
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GSC6_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ESP87991.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candi
major facilitator superfamily protein
qs_6_scaffold_72_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9137..10525)
DNA (1389bp) protein (463aa)
Signal recognition particle 54 kDa protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWC5_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
srp54; signal recognition particle protein
qs_6_scaffold_72_13
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11110..11550
DNA (441bp) protein (147aa)
LysE type translocator n=3 Tax=Haloferax RepID=M0FDX8_9EURY
LysE type translocator {ECO:0000313|EMBL:ELZ62482.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
LysE type translocator
qs_6_scaffold_72_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11575..12042)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H9S1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ81230.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
qs_6_scaffold_72_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12215..13243)
DNA (1029bp) protein (343aa)
Caax amino terminal protease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXL6_9EURY
Caax amino terminal protease {ECO:0000313|EMBL:ESP87902.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
CAAX amino terminal protease family protein
qs_6_scaffold_72_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13240..13593)
DNA (354bp) protein (118aa)
Uncharacterized protein id=24616075 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87903.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_6_scaffold_72_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13595..14155)
DNA (561bp) protein (187aa)
tbp1; TATA-binding transcription initiation factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=24616076 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box-binding protein
qs_6_scaffold_72_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14394..15374
DNA (981bp) protein (327aa)
trmL; N2-methylguanosine tRNA methyltransferase (EC:2.1.1.-)
RNA methylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HB37_9EURY
RNA methylase {ECO:0000313|EMBL:ESP87905.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrel
qs_6_scaffold_72_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15429..16541)
DNA (1113bp) protein (371aa)
Signal recognition particle receptor FtsY n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2C4_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Halofer
signal recognition particle-docking protein FtsY
qs_6_scaffold_72_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16546..17022)
DNA (477bp) protein (159aa)
Prefoldin subunit alpha n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWC9_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
prefoldin subunit alpha/subunit 5
qs_6_scaffold_72_21

Not on your lists


comp(17019..17195)
DNA (177bp) protein (59aa)
50S ribosomal protein L18Ae n=1 Tax=halophilic archaeon DL31 RepID=G2MHK5_9ARCH
ribosomal LX protein
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=756883 sp
qs_6_scaffold_72_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17520..18185)
DNA (666bp) protein (222aa)
translation initiation factor 6 (aeif-6); K03264 translation initiation factor 6 id=24616517 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
ribosome anti-association protein
qs_6_scaffold_72_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18191..18466)
DNA (276bp) protein (92aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e id=24616516 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
rpl31R; 50S ribosomal protein L31
qs_6_scaffold_72_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18467..18619)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBR4_9EURY
50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
qs_6_scaffold_72_25
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18892..19962
DNA (1071bp) protein (357aa)
Transporter gate domain-containing protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZB9_9EURY
Transporter gate domain-containing protein {ECO:0000313|EMBL:ELZ89836.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulf
transporter gate domain-containing protein
qs_6_scaffold_72_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20086..21387
DNA (1302bp) protein (434aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJ14_9EURY
amidohydrolase
qs_6_scaffold_72_27
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21614..22903
DNA (1290bp) protein (430aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DV29_9EURY
qs_6_scaffold_72_28
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23201..23803)
DNA (603bp) protein (201aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1324957 species="A
2'-5' RNA ligase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HB30_9EURY
2'-5' RNA ligase
qs_6_scaffold_72_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23900..24742
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJ12_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87894.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
Displaying items 1-30 of 145 in total

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