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qs_6_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 159 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_118_1
unknown

Not on your lists

comp(84..287)
DNA (204bp) protein (68aa)

This feature has no annotations

qs_6_scaffold_118_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(474..782)
DNA (309bp) protein (103aa)
Nonhistone chromosomal protein n=6 Tax=Haloarcula RepID=V5TJ27_HALHI
nonhistone chromosomal protein
Chromosomal protein MC1 {ECO:0000313|EMBL:AJF27415.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_6_scaffold_118_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

908..1105
DNA (198bp) protein (66aa)
Uncharacterized protein n=9 Tax=Haloarcula RepID=G0HRN0_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA20964.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qs_6_scaffold_118_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1157..2209
DNA (1053bp) protein (351aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:000025
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KME6_HALAR
dihydroorotate dehydrogenase
qs_6_scaffold_118_5
unknown

Not on your lists

comp(2206..2415)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_6_scaffold_118_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2522..4402)
DNA (1881bp) protein (627aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXZ2_9EURY
phenylalanyl-tRNA synthetase subunit beta
qs_6_scaffold_118_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4402..5964)
DNA (1563bp) protein (521aa)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA26180.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA26180.1};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L2F6_9EURY
qs_6_scaffold_118_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6290..7903)
DNA (1614bp) protein (538aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=662477 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JI13_HALVA
tryptophanyl-tRNA synthetase
qs_6_scaffold_118_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8423..9418)
DNA (996bp) protein (332aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227452 species="Archaea
endA; tRNA splicing endonuclease (EC:3.1.27.9) rbh
tRNA-splicing endonuclease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY31_9EURY
qs_6_scaffold_118_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9471..10193)
DNA (723bp) protein (241aa)
top1; topoisomerase DNA binding C4 zinc finger (EC:5.99.1.2)
Topoisomerase DNA binding C4 zinc finger n=2 Tax=Haloarcula hispanica RepID=G0HRM3_HALHT
DNA topoisomerase I {ECO:0000313|EMBL:AHB64682.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_6_scaffold_118_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10290..10937
DNA (648bp) protein (216aa)
Putative haloacid dehalogenase-like hydrolase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYF8_HALMA
haloacid dehalogenase rbh
Putative haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:AAV47695.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
qs_6_scaffold_118_12
unknown

Not on your lists

comp(11009..11257)
DNA (249bp) protein (83aa)

This feature has no annotations

qs_6_scaffold_118_13
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11482..13929)
DNA (2448bp) protein (816aa)
Pre-mRNA splicing helicase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYF9_HALMA
Pre-mRNA splicing helicase {ECO:0000313|EMBL:AAV47694.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (s
brr2; Pre-mRNA splicing helicase rbh
qs_6_scaffold_118_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14124..15044
DNA (921bp) protein (307aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lipoyl synthase n=1 Tax=Halomicrobium katesii RepID=UPI000368CA64
lipoyl synthase
qs_6_scaffold_118_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15457..16572
DNA (1116bp) protein (372aa)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPA3_HALJP
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EMA34933.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
2-oxo acid dehydrogenase
qs_6_scaffold_118_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16569..17564
DNA (996bp) protein (332aa)
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LR59_HALJP
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:EMA34934.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
2-oxoisovalerate dehydrogenase subunit beta
qs_6_scaffold_118_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17567..19051
DNA (1485bp) protein (495aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halomicrobium katesii RepID=UPI0003763770
branched-chain alpha-keto acid dehydrogenase subunit E2
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ACV46808.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicr
qs_6_scaffold_118_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19110..21392
DNA (2283bp) protein (761aa)
Replication factor C small subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH3_9EURY
Replication factor C small subunit {ECO:0000313|EMBL:CCQ33862.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
replication factor C small subunit rbh
qs_6_scaffold_118_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21483..22103
DNA (621bp) protein (207aa)
Flagellin n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J646_HALVA
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
flagellin
qs_6_scaffold_118_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22193..24976
DNA (2784bp) protein (928aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Alanine--tRNA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J752_HALVA
qs_6_scaffold_118_21
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24977..25744
DNA (768bp) protein (256aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UZE9_HALMA
pca; 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AAV47354.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
qs_6_scaffold_118_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25828..26541
DNA (714bp) protein (238aa)
guaA1; GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KML8_HALAR
GMP synthase {ECO:0000313|EMBL:EMA21010.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282.;"
qs_6_scaffold_118_23
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26629..26793)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HR27_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM55818.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_6_scaffold_118_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26869..27642)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LN44_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34967.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
PHP domain-containing protein
qs_6_scaffold_118_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27739..28062
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZF2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14361.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qs_6_scaffold_118_26
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28116..28352)
DNA (237bp) protein (79aa)
CopG family transcriptional regulator n=7 Tax=Haloarcula RepID=V5TLW5_HALHI
CopG family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EMA11905.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_6_scaffold_118_27
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28561..28962)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KMM3_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA21015.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
qs_6_scaffold_118_28
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29042..29755)
DNA (714bp) protein (238aa)
KaiA binding protein n=1 Tax=Haloarcula hispanica N601 RepID=V5THA2_HALHI
KaiA binding protein
KaiA binding protein {ECO:0000313|EMBL:AHB64641.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_6_scaffold_118_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29804..30520)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JHR8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA08672.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_6_scaffold_118_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30551..30799)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000380E321
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47190.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying items 1-30 of 159 in total

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