ggKbase home page

qs_6_scaffold_473

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_473_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(209..652)
DNA (444bp) protein (148aa)
CopG family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1E8_HALMD
CopG family protein
CopG family protein {ECO:0000313|EMBL:ACV47156.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
qs_6_scaffold_473_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(857..1459)
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UYZ4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47509.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_6_scaffold_473_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1460..2395)
DNA (936bp) protein (312aa)
Replication factor A n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JLX3_HALVA
Replication factor A {ECO:0000313|EMBL:EMA09353.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29
rpaA1; replication factor A
qs_6_scaffold_473_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2563..2847
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT01_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48734.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_6_scaffold_473_5
unknown

Not on your lists

2873..2974
DNA (102bp) protein (34aa)

This feature has no annotations

qs_6_scaffold_473_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3001..4200)
DNA (1200bp) protein (400aa)
cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) (EC:3.2.1.14)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WW36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53622.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
qs_6_scaffold_473_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4323..5366)
DNA (1044bp) protein (348aa)
Group 1 glycosyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLN9_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:ELZ22799.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
LPS biosynthesis protein
qs_6_scaffold_473_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5628..7481
DNA (1854bp) protein (618aa)
pop; prolyl oligopeptidase family protein id=24653721 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Dipeptidyl acylaminoacyl-peptidase {ECO:0000313|EMBL:ERG88111.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
peptidase S9
qs_6_scaffold_473_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7530..8084
DNA (555bp) protein (185aa)
HAD-superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNW0_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ24955.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
HAD-superfamily hydrolase
qs_6_scaffold_473_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8099..8332)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0S4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01948.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_6_scaffold_473_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8452..9261
DNA (810bp) protein (270aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KT78_HALAR
qs_6_scaffold_473_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9285..11093)
DNA (1809bp) protein (603aa)
Probable translation initiation factor IF-2 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM29_9EURY
translation initiation factor IF-2
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
qs_6_scaffold_473_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11329..11478)
DNA (150bp) protein (50aa)
hypothetical protein id=24648127 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09252.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_6_scaffold_473_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11652..13496
DNA (1845bp) protein (615aa)
hydrolase n=1 Tax=Halomicrobium katesii RepID=UPI0003805C2E
glycoside hydrolase family protein
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:ACV49183.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_6_scaffold_473_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13801..14691
DNA (891bp) protein (297aa)
hypothetical protein id=24650020 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative archaeal coiled-coil protein {ECO:0000313|EMBL:ERH11098.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_473_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14920..15240
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
DNA-directed RNA polymerase subunit n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LN03_HALWC
tfs3; transcription elongation factor TFS
qs_6_scaffold_473_17
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15241..15885
DNA (645bp) protein (215aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=uncultured archaeon A07HN63 RepID=V4XMB9_9ARCH
methionine sulfoxide reductase A
qs_6_scaffold_473_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16046..16654
DNA (609bp) protein (203aa)
hypothetical protein; K06940 id=24646468 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10643.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_473_19
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16764..17456)
DNA (693bp) protein (231aa)
sdr1; short chain dehydrogenase id=24654800 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Short-chain dehydrogenase {ECO:0000313|EMBL:ERG89746.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sdr; short chain dehydrogenase
Displaying 19 items

View Taxonomy