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qs_6_scaffold_553

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_553_1
unknown

Not on your lists

comp(2..637)
DNA (636bp) protein (212aa)

This feature has no annotations

qs_6_scaffold_553_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1113..1661)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LXD5_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59126.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_6_scaffold_553_3
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1654..2283)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LXD6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59127.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_6_scaffold_553_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2524..3180
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PC36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89651.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qs_6_scaffold_553_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3315..4070
DNA (756bp) protein (252aa)
hypothetical protein id=24646094 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative Zn-dependent hydrolase {ECO:0000313|EMBL:ERH10270.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_553_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4213..5184
DNA (972bp) protein (324aa)
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTV1_9EURY
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein {ECO:0000313|EMBL:CDK38643.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Ha
glnH; ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine/glutamate/polar amino acids)
qs_6_scaffold_553_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5248..6210
DNA (963bp) protein (321aa)
Amino acid ABC transporter membrane protein, paat family n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EDY3_9EURY
Amino acid ABC transporter membrane protein, paat family {ECO:0000313|EMBL:ELZ45273.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source
ABC-type transport system permease protein (probable substrate glutamine/glutamate/polar amino acids)
qs_6_scaffold_553_8

Not on your lists

6207..6944
DNA (738bp) protein (246aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEN07303.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEN07303.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Fe(3+)-transporting ATPase n=1 Tax=halophilic archaeon DL31 RepID=G2MNV4_9ARCH
qs_6_scaffold_553_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7024..8007
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08284.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_6_scaffold_553_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8146..9258)
DNA (1113bp) protein (371aa)
DNA topoisomerase (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=24649819 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase VI, subunit A
qs_6_scaffold_553_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9276..13367)
DNA (4092bp) protein (1364aa)
DNA topoisomerase VI subunit B {ECO:0000313|EMBL:CCQ32295.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CCQ32295.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA topoisomerase VI subunit B (EC:5.99.1.3)
DNA topoisomerase VI subunit B n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D1B4_9EURY
qs_6_scaffold_553_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13548..14831
DNA (1284bp) protein (428aa)
Halocyanin n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JIJ9_9EURY
halocyanin domain protein
Halocyanin domain protein {ECO:0000313|EMBL:ACV48545.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
qs_6_scaffold_553_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14836..15663
DNA (828bp) protein (276aa)
Proline dehydrogenase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DQ02_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:ELZ36234.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137
Proline dehydrogenase
qs_6_scaffold_553_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15843..17363
DNA (1521bp) protein (507aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NP79_HALBP
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ADQ67620.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
qs_6_scaffold_553_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17585..18505
DNA (921bp) protein (307aa)
alpha/beta hydrolase fold protein id=24644408 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative hydrolase or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ERH08631.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophi
putative hydrolase or acyltransferase of alpha/beta superfamily
qs_6_scaffold_553_16
unknown

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comp(18443..18574)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_6_scaffold_553_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18649..18882)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP10_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ69371.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_6_scaffold_553_18
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19166..19642
DNA (477bp) protein (159aa)
AsnC family transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWY3_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ14918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
AsnC family transcriptional regulator
qs_6_scaffold_553_19
unknown

Not on your lists

19687..19965
DNA (279bp) protein (93aa)

This feature has no annotations

qs_6_scaffold_553_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20288..20821
DNA (534bp) protein (178aa)
Amino acid-binding ACT protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM2_9EURY
Amino acid-binding ACT protein {ECO:0000313|EMBL:ELZ22416.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
amino acid-binding protein
qs_6_scaffold_553_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20818..21768
DNA (951bp) protein (317aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGK3_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:ELZ22415.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
qs_6_scaffold_553_22
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21849..24182
DNA (2334bp) protein (778aa)
PAS sensor protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZRQ9_9EURY
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:ELY89014.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
qs_6_scaffold_553_23
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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24333..25511
DNA (1179bp) protein (393aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIY4_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_6_scaffold_553_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25513..25821
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ72_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
rps10p; 30S ribosomal protein S10
qs_6_scaffold_553_trna_1
unknown

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25959..26030
DNA (72bp)
transferRNA
qs_6_scaffold_553_25
unknown

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comp(26291..26554)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 26 items

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