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qs_6_scaffold_1068

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_1068_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..693)
DNA (693bp) protein (231aa)
fdh; formaldehyde dehydrogenase (EC:1.2.1.46); K00148 glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] id=24616335 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Formaldehyde dehydrogenase {ECO:0000313|EMBL:ESP87727.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
formaldehyde dehydrogenase
qs_6_scaffold_1068_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(947..1342)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LS67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35279.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_6_scaffold_1068_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1654..1956
DNA (303bp) protein (101aa)
30S ribosomal protein S24e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTV3_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rps24e; 30S ribosomal protein S24e
qs_6_scaffold_1068_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2004..3956
DNA (1953bp) protein (651aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BF18_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
serine/threonine-protein kinase
qs_6_scaffold_1068_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4100..5731
DNA (1632bp) protein (544aa)
Trk active potasium channel n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K0H1_9EURY
Trk active potasium channel {ECO:0000313|EMBL:EMA14696.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis A
trk; trk active potasium channel
qs_6_scaffold_1068_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6142..7323
DNA (1182bp) protein (394aa)
PHP domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBA8_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:ESP87308.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
PHP domain-containing protein
qs_6_scaffold_1068_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7583..7933
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0H4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39176.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_6_scaffold_1068_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8064..8594
DNA (531bp) protein (177aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; N
Non-canonical purine NTP pyrophosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNF9_9EURY
Ham1 family protein
qs_6_scaffold_1068_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8813..9166
DNA (354bp) protein (118aa)
Transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MXU6_HALMO
Transcriptional regulator {ECO:0000313|EMBL:EMA49255.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 13
transcriptional regulator
qs_6_scaffold_1068_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9241..9735)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22001.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_6_scaffold_1068_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9962..10783)
DNA (822bp) protein (274aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATPase component n=1 Tax=Halogranum salarium B-1 RepID=J3EUW1_9EURY
Spermidine/putrescine ABC transporter ATPase component {ECO:0000313|EMBL:EJN58247.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
qs_6_scaffold_1068_12

Not on your lists

comp(10946..11980)
DNA (1035bp) protein (345aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MK54_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN05476.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_1068_13

Not on your lists

comp(12011..13243)
DNA (1233bp) protein (411aa)
Extracellular solute-binding protein family 1 n=1 Tax=halophilic archaeon DL31 RepID=G2MK53_9ARCH
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEN05475.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_6_scaffold_1068_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13381..14070
DNA (690bp) protein (230aa)
DNA-binding domain of ModE / Molybdate-binding domain of ModE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A555_9EURY
DNA-binding domain of ModE / Molybdate-binding domain of ModE {ECO:0000313|EMBL:GAD52774.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
transcriptional regulator, ModE family
qs_6_scaffold_1068_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14588..15253)
DNA (666bp) protein (222aa)
TRK potassium uptake system protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMS7_HALVA
TRK potassium uptake system protein {ECO:0000313|EMBL:EMA09279.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
trkA6; TRK potassium uptake system protein
qs_6_scaffold_1068_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15433..16200)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH02_9EURY
UPF0218 protein C449_12837 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
qs_6_scaffold_1068_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16204..16401)
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=2 Tax=Halococcus RepID=M0N3U6_HALMO
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
DNA-directed RNA polymerase subunit E, RpoE2
qs_6_scaffold_1068_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16405..16980)
DNA (576bp) protein (192aa)
rpoE'; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:AHB64571.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AHB64571.1};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit E n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KX16_9EURY
qs_6_scaffold_1068_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16983..17573)
DNA (591bp) protein (197aa)
Putative RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD57_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA43702.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
SSU processome protein utp24
qs_6_scaffold_1068_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17583..18818)
DNA (1236bp) protein (412aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
tif2g; translation initiation factor IF-2 subunit gamma
qs_6_scaffold_1068_21
unknown

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comp(18954..19631)
DNA (678bp) protein (226aa)

This feature has no annotations

qs_6_scaffold_1068_22
unknown

Not on your lists

comp(19745..19981)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_6_scaffold_1068_23
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20197..20436
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSX5_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60855.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_6_scaffold_1068_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20492..21460
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_6_scaffold_1068_25

Not on your lists

comp(21521..22159)
DNA (639bp) protein (213aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AEN07702.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEN07702.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Heavy metal translocating P-type ATPase n=2 Tax=Archaea RepID=B9LW19_HALLT
heavy metal translocating P-type ATPase
Displaying 25 items

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