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qs_6_scaffold_1252

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_1252_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..760
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QND7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93932.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
kefC; potassium transport protein kefC
qs_6_scaffold_1252_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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907..1638
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
qs_6_scaffold_1252_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1712..2587)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_6_scaffold_1252_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2793..4028
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
qs_6_scaffold_1252_5
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4097..4504)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
qs_6_scaffold_1252_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4649..5989)
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
qs_6_scaffold_1252_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6525..7892
DNA (1368bp) protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
qs_6_scaffold_1252_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7871..9010)
DNA (1140bp) protein (380aa)
HdaI-type histone deacetylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUA5_9EURY
HdaI-type histone deacetylase {ECO:0000313|EMBL:EMA49322.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
hda1; HdaI-type histone deacetylase
qs_6_scaffold_1252_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9007..9465)
DNA (459bp) protein (153aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ45146.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
qs_6_scaffold_1252_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9694..11214)
DNA (1521bp) protein (507aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
OB-fold tRNA/helicase-type nucleic acid binding protein
qs_6_scaffold_1252_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11550..12278)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_1252_12
unknown

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comp(12420..12971)
DNA (552bp) protein (184aa)

This feature has no annotations

qs_6_scaffold_1252_trna_1
unknown

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13215..13287
DNA (73bp)
transferRNA
qs_6_scaffold_1252_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13515..14507)
DNA (993bp) protein (331aa)
Alpha beta-propellor repeat-containing integrin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN27_9EURY
Alpha beta-propellor repeat-containing integrin {ECO:0000313|EMBL:EMA46144.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
qs_6_scaffold_1252_14
unknown

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comp(14533..14682)
DNA (150bp) protein (50aa)

This feature has no annotations

qs_6_scaffold_1252_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14685..15794
DNA (1110bp) protein (370aa)
Amidohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRM1_9EURY
Amidohydrolase {ECO:0000313|EMBL:EFW92640.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.
amidohydrolase
qs_6_scaffold_1252_16
unknown

Not on your lists

comp(15760..16272)
DNA (513bp) protein (171aa)

This feature has no annotations

qs_6_scaffold_1252_17
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17080..17721
DNA (642bp) protein (214aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E4K2_9GAMM
Epimerase {ECO:0000313|EMBL:KIA64142.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
epimerase
qs_6_scaffold_1252_18
unknown

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comp(17845..17931)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 19 items

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