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qs_6_scaffold_1423

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_1423_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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448..822
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82812.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qs_6_scaffold_1423_2
unknown

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comp(866..1081)
DNA (216bp) protein (72aa)

This feature has no annotations

qs_6_scaffold_1423_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1280..2521
DNA (1242bp) protein (414aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY63_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA50667.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Mandelate racemase/muconate lactonizing protein
qs_6_scaffold_1423_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2579..2977)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_6_scaffold_1423_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3072..4010
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01992.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_6_scaffold_1423_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4738..6606)
DNA (1869bp) protein (623aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
qs_6_scaffold_1423_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6841..8277)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
qs_6_scaffold_1423_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8510..9628)
DNA (1119bp) protein (373aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
TrmB family transcriptional regulator
qs_6_scaffold_1423_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11614..12702
DNA (1089bp) protein (363aa)
Xaa-Pro aminopeptidase M24 family protein (EC:3.4.-.-)
Xaa-pro aminopeptidase n=1 Tax=Halogranum salarium B-1 RepID=J3A1U8_9EURY
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EJN59298.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_6_scaffold_1423_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12788..13705)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQE5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93209.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_6_scaffold_1423_11
Blastomyces dermatitidis, Blastomyces, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(13785..14171)
DNA (387bp) protein (129aa)
U3 small nucleolar RNA-associated protein 5 {ECO:0000313|EMBL:EGE79276.1}; TaxID=653446 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Aj
qs_6_scaffold_1423_12
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14411..15505
DNA (1095bp) protein (365aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y2L3_9ARCH
Cellulase M related protein {ECO:0000313|EMBL:ERH07812.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qs_6_scaffold_1423_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15738..16724
DNA (987bp) protein (329aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM7_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA50418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain-containing protein
qs_6_scaffold_1423_14
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16940..17197
DNA (258bp) protein (86aa)
Like-Sm ribonucleoprotein core n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SRE5_NATMM
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELY25306.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain
qs_6_scaffold_1423_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17194..17364
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qs_6_scaffold_1423_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17491..18999
DNA (1509bp) protein (503aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR41_HALBP
qs_6_scaffold_1423_17
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19196..19375)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AI78_NATA1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY97078.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
qs_6_scaffold_1423_18

Not on your lists

comp(19372..19788)
DNA (417bp) protein (139aa)
Putative metal-dependent enzyme of the double-stranded beta helix superfamily n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDW9_9ARCH
Putative metal-dependent enzyme of the double-stranded beta helix superfamily {ECO:0000313|EMBL:ESS06164.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB7
hypothetical protein
qs_6_scaffold_1423_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19893..21047
DNA (1155bp) protein (385aa)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
aspartate/tyrosine/aromatic aminotransferase
qs_6_scaffold_1423_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21237..21614
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU04_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor IF-5A
qs_6_scaffold_1423_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21710..22543
DNA (834bp) protein (278aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0M5_9EURY
Agmatinase {ECO:0000313|EMBL:EMA50230.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
qs_6_scaffold_1423_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22890..23564
DNA (675bp) protein (225aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797303 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFY5_NATP1
dinuclear metal center protein, YbgI/SA1388 family
qs_6_scaffold_1423_23
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23959..24546
DNA (588bp) protein (196aa)
Rhodopsin n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E2A1_9EURY
Rhodopsin {ECO:0000313|EMBL:ELZ41168.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288.;"
rhodopsin
qs_6_scaffold_1423_24
unknown

Not on your lists

24492..24776
DNA (285bp) protein (95aa)

This feature has no annotations

qs_6_scaffold_1423_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25077..25874
DNA (798bp) protein (266aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:ELZ24850.1}; EC=2.5.1.46 {ECO:0000313|EMBL:ELZ24850.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
Deoxyhypusine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNK6_9EURY
deoxyhypusine synthase
qs_6_scaffold_1423_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25982..26383
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57372.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_6_scaffold_1423_27
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26517..27029
DNA (513bp) protein (171aa)
Transposase IS4 family protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX33_HALLT
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACM59024.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
Displaying 27 items

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