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qs_6_scaffold_2495

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_2495_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(37..612)
DNA (576bp) protein (192aa)
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
qs_6_scaffold_2495_2
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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885..1820
DNA (936bp) protein (312aa)
RNA methylase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VGM8_9EURY
RNA methylase {ECO:0000313|EMBL:ELY36239.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
RNA methylase
qs_6_scaffold_2495_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1850..2260)
DNA (411bp) protein (137aa)
Ferredoxin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2B2_9EURY
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KDS90397.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
qs_6_scaffold_2495_4
unknown

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3011..3172
DNA (162bp) protein (54aa)

This feature has no annotations

qs_6_scaffold_2495_5
unknown

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3187..3399
DNA (213bp) protein (71aa)

This feature has no annotations

qs_6_scaffold_2495_6
unknown

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3448..3594
DNA (147bp) protein (49aa)

This feature has no annotations

qs_6_scaffold_2495_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3788..4717)
DNA (930bp) protein (310aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9A7_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
qs_6_scaffold_2495_8
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4976..5695
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
qs_6_scaffold_2495_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5779..5997
DNA (219bp) protein (73aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P465_HALMD
Bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ACV47887.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
Displaying 9 items

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