ggKbase home page

qs_6_scaffold_288

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_288_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(606..1034)
DNA (429bp) protein (143aa)
NifU-like protein/SUF system FeS assembly protein, NifU family n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2H8_9EURY
NifU-like protein/SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ELZ29726.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
SUF system FeS assembly protein, NifU family
qs_6_scaffold_288_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1252..2508
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4V2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29727.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_288_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2519..3289)
DNA (771bp) protein (257aa)
Putative methyltransferase type 11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4E6_9EURY
Putative methyltransferase type 11 {ECO:0000313|EMBL:ELZ29728.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carl
methyltransferase
qs_6_scaffold_288_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3491..4141)
DNA (651bp) protein (217aa)
ferredoxin n=1 Tax=Halomicrobium katesii RepID=UPI00036066A8
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ACV46565.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC
qs_6_scaffold_288_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4290..5531)
DNA (1242bp) protein (414aa)
Cysteine desulfurase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6E8_9EURY
Cysteine desulfurase {ECO:0000313|EMBL:ELZ29739.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
cysteine desulfurase
qs_6_scaffold_288_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5755..5946)
DNA (192bp) protein (64aa)
Bacterio-opsin activator-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KR51_HALAR
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:EMA23777.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ar
bacterio-opsin activator
qs_6_scaffold_288_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6174..6464)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2P1_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47363.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_6_scaffold_288_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6465..7193)
DNA (729bp) protein (243aa)
TPR repeat-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2I5_9EURY
TPR repeat-containing protein {ECO:0000313|EMBL:ELZ29736.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
hypothetical protein
qs_6_scaffold_288_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7795..8352
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=797114 species="Ar
2'-5' RNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D661_9EURY
2'-5' RNA ligase
qs_6_scaffold_288_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8365..8649)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D469_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29633.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_6_scaffold_288_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9008..9160
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YTS3_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L39e
qs_6_scaffold_288_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9157..9435
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F6_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L31E
qs_6_scaffold_288_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9438..10103
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D656_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
qs_6_scaffold_288_14
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10100..10819)
DNA (720bp) protein (240aa)
Type 12 methyltransferase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M585_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:EMA40548.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JC
type 12 methyltransferase
qs_6_scaffold_288_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11130..11303
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
qs_6_scaffold_288_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11300..11770
DNA (471bp) protein (157aa)
Prefoldin subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4L7_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
prefoldin subunit alpha
qs_6_scaffold_288_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11777..13051
DNA (1275bp) protein (425aa)
Signal recognition particle receptor FtsY n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D291_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
ftsY; signal recognition particle receptor
qs_6_scaffold_288_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13215..13523)
DNA (309bp) protein (103aa)
PKD domain-containing protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DLZ0_9EURY
hypothetical PKD domain protein
Hypothetical PKD domain protein {ECO:0000313|EMBL:CCQ33700.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamat
qs_6_scaffold_288_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13658..13822)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29625.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_288_20
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14275..16002
DNA (1728bp) protein (576aa)
Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNA3_HALUD
nitrite and sulfite reductase 4Fe-4S domain-containing protein
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ACV11503.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorh
qs_6_scaffold_288_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15995..17506
DNA (1512bp) protein (504aa)
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D460_9EURY
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein {ECO:0000313|EMBL:ELZ29623.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosi
coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
qs_6_scaffold_288_22
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17669..18046)
DNA (378bp) protein (126aa)
Dihydroxyacetone kinase DhaM subunit n=1 Tax=uncultured archaeon A07HR67 RepID=V4X5J5_9ARCH
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:EMA58553.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
dihydroxyacetone kinase, phosphotransfer subunit
qs_6_scaffold_288_23
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18049..18762)
DNA (714bp) protein (238aa)
dihydroxyacetone kinase n=1 Tax=Halorubrum sp. T3 RepID=UPI00035EBE00
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:ELZ45663.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
dihydroxyacetone kinase, L subunit
qs_6_scaffold_288_24

Not on your lists

comp(18759..19757)
DNA (999bp) protein (333aa)
Dihydroxyacetone kinase DhaK subunit {ECO:0000313|EMBL:ESS02842.1}; EC=2.7.1.121 {ECO:0000313|EMBL:ESS02842.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A0
dihydroxyacetone kinase subunit DhaK (EC:2.7.1.29)
Dihydroxyacetone kinase DhaK subunit n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC7_9ARCH
qs_6_scaffold_288_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19912..22074)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29620.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_288_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22166..22555
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2T6_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47408.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_6_scaffold_288_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22980..24221)
DNA (1242bp) protein (414aa)
Peptide chain release factor subunit 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2I7_9EURY
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacte
peptide chain release factor 1
qs_6_scaffold_288_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24431..25237
DNA (807bp) protein (269aa)
Septum site-determining protein MinD n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D426_9EURY
Septum site-determining protein MinD {ECO:0000313|EMBL:ELZ28909.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
septum formation initiator
qs_6_scaffold_288_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25245..25529)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D375_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29137.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_6_scaffold_288_30
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25701..25898
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPK5_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12760.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
Displaying items 1-30 of 40 in total

View Taxonomy