ggKbase home page

qs_7_scaffold_172

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_172_trna_3
unknown

Not on your lists

comp(46..117)
DNA (72bp)
transferRNA
qs_7_scaffold_172_trna_1
unknown

Not on your lists

406..491
DNA (86bp)
transferRNA
qs_7_scaffold_172_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1011..1670)
DNA (660bp) protein (220aa)
rpoE; RNA polymerase sigma-E factor
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_7_scaffold_172_2
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2033..3208
DNA (1176bp) protein (392aa)
Asparaginase {ECO:0000313|EMBL:ETN93994.1}; EC=3.4.19.5 {ECO:0000313|EMBL:ETN93994.1};; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" s
asparaginase (EC:3.5.1.1)
asparaginase n=1 Tax=Salisaeta longa RepID=UPI0003B682EF
qs_7_scaffold_172_3
unknown

Not on your lists

3610..4179
DNA (570bp) protein (190aa)

This feature has no annotations

qs_7_scaffold_172_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4285..5079
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBH1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25376.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_172_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5119..6192)
DNA (1074bp) protein (358aa)
Putative ATPase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H606_SALRM
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH23461.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_7_scaffold_172_6
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6281..6799)
DNA (519bp) protein (173aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qs_7_scaffold_172_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7038..8153
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXK9_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI14611.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain D
qs_7_scaffold_172_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8300..9706)
DNA (1407bp) protein (469aa)
ATPase, AAA family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3W1_SALRD
recombination factor protein RarA
ATPase, AAA family protein {ECO:0000313|EMBL:ABC44402.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_7_scaffold_172_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9941..10867)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A357_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59778.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alpha/beta fold superfamily hydrolase
qs_7_scaffold_172_10
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10910..11674)
DNA (765bp) protein (255aa)
Nucleotidyl transferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A146_MELRP
Nucleotidyltransferase {ECO:0000313|EMBL:KGE87746.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactyliba
nucleotidyl transferase
qs_7_scaffold_172_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11812..12333)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBZ0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25545.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_172_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12643..13605
DNA (963bp) protein (321aa)
metallo-beta-lactamase superfamily protein
metallo-beta-lactamase superfamily protein id=24657864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0173 metal-dependent hydrolase SRU_1937 {ECO:0000255|HAMAP-Rule:MF_00457}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_7_scaffold_172_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13720..14424)
DNA (705bp) protein (235aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Phosphonate-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE24_RHOMR
qs_7_scaffold_172_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14708..16144)
DNA (1437bp) protein (479aa)
RND transporter n=1 Tax=Salisaeta longa RepID=UPI0003B452E2
emrA; membrane fusion efflux protein
Membrane fusion efflux protein, putative {ECO:0000313|EMBL:CBH25986.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_7_scaffold_172_15
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16250..17794)
DNA (1545bp) protein (515aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5FA8C
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACF13111.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpet
qs_7_scaffold_172_trna_2
unknown

Not on your lists

comp(18092..18180)
DNA (89bp)
transferRNA
qs_7_scaffold_172_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18317..18634)
DNA (318bp) protein (106aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGD0_RHOMR
dTDP-glucose 4,6-dehydratase
Displaying 19 items

View Taxonomy