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qs_7_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 212 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2_1
unknown

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3..74
DNA (72bp) protein (24aa)

This feature has no annotations

qs_7_scaffold_2_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(329..1015)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EN5_HALWD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAJ53587.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
qs_7_scaffold_2_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1528..2118)
DNA (591bp) protein (197aa)
Cell division control protein 6 n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DWF3_9EURY
orc12; Orc1-type DNA replication protein
Cell division control protein 6 {ECO:0000313|EMBL:ELZ39017.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiens
qs_7_scaffold_2_4
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2311..2493)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQA5_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01698.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
qs_7_scaffold_2_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2674..3288)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LM90_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41210.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qs_7_scaffold_2_6
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3245..3868)
DNA (624bp) protein (208aa)
TrmB family transcription regulator n=2 Tax=Halobacterium salinarum RepID=B0R8Q6_HALS3
hypothetical protein
TrmB family transcription regulator {ECO:0000313|EMBL:CAP15090.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium
qs_7_scaffold_2_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4529..4933
DNA (405bp) protein (135aa)
MarR family transcriptional regulator n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0JY10_9EURY
MarR family transcriptional regulator {ECO:0000313|EMBL:EMA13363.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula am
putative transcriptional regulator
qs_7_scaffold_2_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4983..5723)
DNA (741bp) protein (247aa)
livF2; branched-chain amino acids ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein id=24630392 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92683.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
qs_7_scaffold_2_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5720..6493)
DNA (774bp) protein (258aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY8_9EURY
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AHG04854.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qs_7_scaffold_2_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6490..7482)
DNA (993bp) protein (331aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY9_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHG04853.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source
livM; ABC-type branched-chain amino acid transport systems, permease II
qs_7_scaffold_2_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7482..8348)
DNA (867bp) protein (289aa)
livH2; branched-chain amino acids ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24630389 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERG92680.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
livH; ABC-type branched-chain amino acid transport system, permease I
qs_7_scaffold_2_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8360..9712)
DNA (1353bp) protein (451aa)
Extracellular ligand-binding receptor n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ1_9EURY
ABC transporter {ECO:0000313|EMBL:AHG04851.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livJ2; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
qs_7_scaffold_2_13
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10330..11163
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TGY8_DESML
qs_7_scaffold_2_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11232..11462
DNA (231bp) protein (77aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Probable ADP-ribosylglycohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
qs_7_scaffold_2_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12360..12647
DNA (288bp) protein (96aa)
IS240-type transposase ISNph1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN94_NATPD
transposase
ISH14-type transposase ISNph1 {ECO:0000313|EMBL:CAI50410.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_7_scaffold_2_16
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13311..13469
DNA (159bp) protein (53aa)
Site-specific recombinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSS0_9EURY
Site-specific recombinase {ECO:0000313|EMBL:ELZ84510.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;
hypothetical protein
qs_7_scaffold_2_17
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13576..14211
DNA (636bp) protein (212aa)
Isochorismatase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPN9_9EURY
Isochorismatase {ECO:0000313|EMBL:ELY38996.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
nicotinamidase-like amidase
qs_7_scaffold_2_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14456..15247
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3Q5_HALJB
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ13396.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalka
qs_7_scaffold_2_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(15389..15712)
DNA (324bp) protein (108aa)
Dihydrodiol dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H5_THERP
dihydrodiol dehydrogenase
Dihydrodiol dehydrogenase {ECO:0000313|EMBL:ACM07129.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain A
qs_7_scaffold_2_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15715..16248)
DNA (534bp) protein (178aa)
small terminal subunit of phenylpropionate dioxygenase (EC:1.14.12.19)
Small terminal subunit of phenylpropionate dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0ND58_9EURY
Small terminal subunit of phenylpropionate dioxygenase {ECO:0000313|EMBL:EMA54999.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
qs_7_scaffold_2_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16253..17713)
DNA (1461bp) protein (487aa)
Putative dioxygenase alpha subunit YeaW / large terminal subunit of phenylpropionate dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBR8_9EURY
narAa; naphthalene dioxygenase large subunit
Putative dioxygenase alpha subunit YeaW / large terminal subunit of phenylpropionate dioxygenase {ECO:0000313|EMBL:EMA54998.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
qs_7_scaffold_2_22
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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18230..19000
DNA (771bp) protein (257aa)
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H8X3_9EURY
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase {ECO:0000313|EMBL:KDE59767.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" sourc
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
qs_7_scaffold_2_23
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19079..19897
DNA (819bp) protein (273aa)
UPI0003D654DD related cluster n=1 Tax=unknown RepID=UPI0003D654DD
Putative amidohydrolase {ECO:0000313|EMBL:KEF37267.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
qs_7_scaffold_2_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19898..20851)
DNA (954bp) protein (318aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUP7_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EFW91704.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
zinc-binding dehydrogenase
qs_7_scaffold_2_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20970..21773
DNA (804bp) protein (268aa)
Creatininase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJC3_9EURY
Creatininase {ECO:0000313|EMBL:EMA44834.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
creatininase
qs_7_scaffold_2_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21782..23857)
DNA (2076bp) protein (692aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABQ70566.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABQ70566.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VE50_SPHWW
qs_7_scaffold_2_27
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(23854..25671)
DNA (1818bp) protein (606aa)
Hydantoin utilization protein B n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RGN0_9ACTO
Hydantoin utilization protein B {ECO:0000313|EMBL:GAB24231.1}; TaxID=1077976 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16
hypothetical protein
qs_7_scaffold_2_28

Not on your lists

25837..27504
DNA (1668bp) protein (556aa)
acetolactate synthase (EC:2.2.1.6) rbh
Acetolactate synthase {ECO:0000313|EMBL:AEN07572.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEN07572.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetolactate synthase n=1 Tax=halophilic archaeon DL31 RepID=G2MNY1_9ARCH
qs_7_scaffold_2_29
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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27550..28284
DNA (735bp) protein (245aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDA53641.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaeroba
2-keto-4-pentenoate hydratase id=24618434 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
2-keto-4-pentenoate hydratase
qs_7_scaffold_2_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28332..29081
DNA (750bp) protein (250aa)
Oxidoreductase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J7_9EURY
oxidoreductase
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
Displaying items 1-30 of 212 in total

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