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qs_7_scaffold_2225

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2225_1
unknown

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3..596
DNA (594bp) protein (198aa)

This feature has no annotations

qs_7_scaffold_2225_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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915..1298
DNA (384bp) protein (128aa)
Putative restriction/modification enzyme n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWH0_HALLT
putative restriction/modification enzyme
Putative restriction/modification enzyme {ECO:0000313|EMBL:ACM58811.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacu
qs_7_scaffold_2225_3
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1844..2797)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AGE8_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97446.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_7_scaffold_2225_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2802..3176)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VYN9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01351.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_7_scaffold_2225_trna_1
unknown

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comp(4118..4190)
DNA (73bp)
transferRNA
qs_7_scaffold_2225_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4331..4636
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28010.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_7_scaffold_2225_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5323..5490
DNA (168bp) protein (56aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1};; TaxID=358396 species="
DNA-directed RNA polymerase subunit H n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI08_9EURY
DNA-directed RNA polymerase subunit H
qs_7_scaffold_2225_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5487..7052
DNA (1566bp) protein (522aa)
rpoB2; DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CCQ37957.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ37957.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTU2_NATM8
qs_7_scaffold_2225_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7054..8883
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Natronomonas pharaonis RepID=Q3IUN3_NATPD
qs_7_scaffold_2225_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8880..10697
DNA (1818bp) protein (606aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
rpoA; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Haloarcula RepID=M0K2W8_9EURY
qs_7_scaffold_2225_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11098..13191
DNA (2094bp) protein (698aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (st
DNA-directed RNA polymerase subunit A' n=2 Tax=Halobacterium salinarum RepID=RPOA1_HALS3
qs_7_scaffold_2225_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13184..14008
DNA (825bp) protein (275aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
qs_7_scaffold_2225_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14060..15730
DNA (1671bp) protein (557aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
qs_7_scaffold_2225_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15735..16160
DNA (426bp) protein (142aa)
Transcription elongation factor NusA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN0_NATPD
nusA; transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source
qs_7_scaffold_2225_14
unknown

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comp(16201..16506)
DNA (306bp) protein (102aa)

This feature has no annotations

qs_7_scaffold_2225_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16691..16774
DNA (84bp) protein (28aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.
Displaying 16 items

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