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qs_7_scaffold_2625

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2625_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..226
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EM30_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48143.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
qs_7_scaffold_2625_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1164..1328
DNA (165bp) protein (55aa)
Sodium/hydrogen exchanger n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BV26_9EURY
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66031.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
NhaP-type Na+(K+)/H+ antiporter
qs_7_scaffold_2625_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1385..2551)
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000255|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000255|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DHQS_NATPD
qs_7_scaffold_2625_4
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2829..3239)
DNA (411bp) protein (137aa)
Bacterial regulatory protein, arsR family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUP7_HALBP
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKH97453.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halana
ArsR family transcriptional regulator
qs_7_scaffold_2625_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3337..3957
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUP6_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ68766.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_7_scaffold_2625_6

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comp(4032..5081)
DNA (1050bp) protein (350aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_7_scaffold_2625_7

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comp(5273..6646)
DNA (1374bp) protein (458aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qs_7_scaffold_2625_8
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6807..7688
DNA (882bp) protein (294aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH03666.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halor
inner-membrane translocator
qs_7_scaffold_2625_9
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7685..8491
DNA (807bp) protein (269aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Archaea RepID=U1NJD6_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
qs_7_scaffold_2625_10

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8488..9201
DNA (714bp) protein (238aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Archaea RepID=U1P191_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_7_scaffold_2625_11
unknown

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9400..9498
DNA (99bp) protein (33aa)

This feature has no annotations

qs_7_scaffold_2625_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9796..11697
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMC7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50732.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
Displaying 12 items

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