ggKbase home page

qs_7_scaffold_2781

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2781_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..1096)
DNA (1095bp) protein (365aa)
Allantoinase (EC:3.5.2.5)
Allantoinase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM12_9EURY
Allantoinase {ECO:0000313|EMBL:EMA34607.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
qs_7_scaffold_2781_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1219..1638
DNA (420bp) protein (140aa)
L-iditol 2-dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] Tax=RBG_16_Deltaproteobacteria_47_11_curated
L-iditol 2-dehydrogenase id=3780695 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
qs_7_scaffold_2781_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

1635..2324
DNA (690bp) protein (230aa)
Alcohol dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ2_9EURY
alcohol dehydrogenase Tax=RBG_13_Bathyarchaeota_38_9_curated
alcohol dehydrogenase GroES domain protein
qs_7_scaffold_2781_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2442..3233)
DNA (792bp) protein (264aa)
Transcription initiation factor TFB {ECO:0000313|EMBL:CCQ36824.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
qs_7_scaffold_2781_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3895..5424
DNA (1530bp) protein (510aa)
gatA2; amidase (EC:3.5.1.4)
Amidase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LCM6_HALJP
Amidase {ECO:0000313|EMBL:EMA31336.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
qs_7_scaffold_2781_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5473..5640)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB14_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16467.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_7_scaffold_2781_7
unknown

Not on your lists

5863..6195
DNA (333bp) protein (111aa)

This feature has no annotations

qs_7_scaffold_2781_8
unknown

Not on your lists

comp(6360..6701)
DNA (342bp) protein (114aa)

This feature has no annotations

qs_7_scaffold_2781_9
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6931..8709)
DNA (1779bp) protein (593aa)
Type III restriction protein res subunit n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0H561_HALL2
Type III restriction protein res subunit {ECO:0000313|EMBL:ELZ78908.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucen
type III restriction protein res subunit
qs_7_scaffold_2781_10
Halovirus HF1, Viruses

Not on your lists

comp(8799..10460)
DNA (1662bp) protein (554aa)
ATP-dependent helicase n=2 Tax=Haloviruses RepID=Q8V6T8_9VIRU
ATP-dependent helicase {ECO:0000313|EMBL:AAO61318.1}; TaxID=222645 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.;" source
helicase c2
qs_7_scaffold_2781_11
unknown

Not on your lists

comp(10527..10778)
DNA (252bp) protein (84aa)

This feature has no annotations

qs_7_scaffold_2781_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11040..12680)
DNA (1641bp) protein (547aa)
phrB2; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG81_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ22261.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
qs_7_scaffold_2781_13
unknown

Not on your lists

comp(13588..13785)
DNA (198bp) protein (66aa)

This feature has no annotations

qs_7_scaffold_2781_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13904..14212)
DNA (309bp) protein (103aa)
Zinc finger SWIM domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2U2_HALTV
zinc finger SWIM domain protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ADB63689.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
qs_7_scaffold_2781_15
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14382..14738
DNA (357bp) protein (119aa)
Hth domain-containing protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IKL9_9EURY
Hth domain-containing protein {ECO:0000313|EMBL:ELZ96567.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATC
qs_7_scaffold_2781_16
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14735..14911
DNA (177bp) protein (59aa)
PilT protein domain protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XKL5_9EURY
PilT protein domain protein {ECO:0000313|EMBL:ELY61956.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM
hypothetical protein
Displaying 16 items

View Taxonomy