ggKbase home page

qs_7_scaffold_3458

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_3458_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..592
DNA (591bp) protein (197aa)
HTTM domain protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CU78_9EURY
HTTM domain protein {ECO:0000313|EMBL:ELZ26776.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
HTTM domain-containing protein
qs_7_scaffold_3458_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

757..1137
DNA (381bp) protein (127aa)
Thioredoxin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL98_NATM8
trxA5; thioredoxin
Thioredoxin {ECO:0000313|EMBL:CCQ37333.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM 1
qs_7_scaffold_3458_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1219..3180)
DNA (1962bp) protein (654aa)
Thioredoxin domain-containing protein n=2 Tax=Haloarcula hispanica RepID=G0HTA4_HALHT
thioredoxin domain containing protein
Thioredoxin domain containing protein {ECO:0000313|EMBL:AJF27218.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
qs_7_scaffold_3458_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3282..3983
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP77_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50075.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_7_scaffold_3458_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4250..5392
DNA (1143bp) protein (381aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LT26_9EURY
qs_7_scaffold_3458_6
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5693..6292
DNA (600bp) protein (200aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Halofer
tRNA (pseudouridine(54)-N(1))-methyltransferase n=3 Tax=Haloferax RepID=M0FP41_9EURY
hypothetical protein
qs_7_scaffold_3458_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6859..7146)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NJE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56805.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_7_scaffold_3458_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7268..7612
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NI67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56804.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_7_scaffold_3458_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7728..8489
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRI9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49254.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_7_scaffold_3458_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8840..9142
DNA (303bp) protein (101aa)
AbrB family transcription regulator n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P425_9EURY
AbrB family transcription regulator {ECO:0000313|EMBL:EMA64304.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyti
AbrB family transcription regulator
qs_7_scaffold_3458_11
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9467..9967
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IIY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96761.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_7_scaffold_3458_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9982..10560
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GXZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ76438.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
qs_7_scaffold_3458_13
unknown

Not on your lists

11133..11483
DNA (351bp) protein (117aa)

This feature has no annotations

qs_7_scaffold_3458_14
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11855..12163
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=M0FPV7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE58884.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
qs_7_scaffold_3458_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12144..12542
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F8B3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56276.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qs_7_scaffold_3458_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12724..13032
DNA (309bp) protein (103aa)
Transcription regulator CopG-RepA family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DG40_9EURY
Transcription regulator CopG-RepA family protein {ECO:0000313|EMBL:ERJ04982.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
qs_7_scaffold_3458_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13225..13407
DNA (183bp) protein (61aa)
hypothetical protein id=24628924 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91667.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_7_scaffold_3458_18
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13428..13865)
DNA (438bp) protein (146aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1PAB9_9EURY
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ERH06944.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius
nucleic acid-binding protein, contains PIN domain
qs_7_scaffold_3458_19
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13862..14161)
DNA (300bp) protein (100aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Halonotius sp. J07HN4 RepID=U1QJ64_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH06943.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
AbrB family transcriptional regulator
qs_7_scaffold_3458_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14589..14954
DNA (366bp) protein (122aa)
mch; probable methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
Probable methenyltetrahydrofolate cyclohydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ11_NATM8
Displaying 20 items

View Taxonomy