ggKbase home page

qs_7_scaffold_44

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_44_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..236)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MW75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48695.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_7_scaffold_44_2
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(268..891)
DNA (624bp) protein (208aa)
acd6; acyl-CoA dehydrogenase (EC:1.3.99.3)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Halorubrum RepID=M0DBC3_9EURY
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EMA68482.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis
qs_7_scaffold_44_3
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1587..2450
DNA (864bp) protein (288aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IFV2_HALRX
flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:AGB17111.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
qs_7_scaffold_44_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2473..4638
DNA (2166bp) protein (722aa)
NADH:flavin oxidoreductase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IGJ6_HALRX
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGB17112.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 1819
qs_7_scaffold_44_5
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4730..5866
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VP17_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY38950.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
acyl-CoA dehydrogenase
qs_7_scaffold_44_6
unknown

Not on your lists

comp(5848..5961)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_7_scaffold_44_7

Not on your lists

comp(5958..6605)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGM3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06414.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_7_scaffold_44_8
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6938..9025
DNA (2088bp) protein (696aa)
Hydantoin utilization protein A n=1 Tax=Streptomyces sp. AA4 RepID=D9VED0_9ACTO
Hydantoin utilization protein A {ECO:0000313|EMBL:EFL07990.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
N-methylhydantoinase A
qs_7_scaffold_44_9
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9026..10975
DNA (1950bp) protein (650aa)
5-oxoprolinase (EC:3.5.2.9)
Hydantoin utilization protein B n=1 Tax=Streptomyces sp. AA4 RepID=D9VEC9_9ACTO
Hydantoin utilization protein B {ECO:0000313|EMBL:EFL07989.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
qs_7_scaffold_44_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10972..11256
DNA (285bp) protein (95aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
qs_7_scaffold_44_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11318..12307)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP68_9EURY
2-oxoisovalerate dehydrogenase subunit beta
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:AHG02155.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagni
qs_7_scaffold_44_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12315..13490)
DNA (1176bp) protein (392aa)
2-oxo-3-methylvalerate dehydrogenase E1 component subunit alpha n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WNI2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02156.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_7_scaffold_44_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13656..14096
DNA (441bp) protein (147aa)
MaoC domain protein dehydratase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0A9_HALMD
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ACV48901.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_7_scaffold_44_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14375..15847
DNA (1473bp) protein (491aa)
Amino acid permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJ28_HALMO
Amino acid permease {ECO:0000313|EMBL:EMA45707.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
amino acid permease
qs_7_scaffold_44_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

15880..17091
DNA (1212bp) protein (404aa)
L-threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Threonine synthase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I739_HALRX
threonine synthase
qs_7_scaffold_44_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17156..18319)
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWV1_9EURY
Aminotransferase class I and II {ECO:0000313|EMBL:EFW90754.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
class I and II aminotransferase
qs_7_scaffold_44_17
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18407..19423
DNA (1017bp) protein (339aa)
aldolase n=1 Tax=Sciscionella marina RepID=UPI00037C44D0
Aldolase {ECO:0000313|EMBL:KDE09923.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
narC; putative aldolase NarC
qs_7_scaffold_44_18

Not on your lists

comp(19417..20892)
DNA (1476bp) protein (492aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7F7_9ARCH
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESS06992.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qs_7_scaffold_44_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20979..22127
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZAK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57670.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
aminotransferase class V
qs_7_scaffold_44_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22200..22922
DNA (723bp) protein (241aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN0_NATM8
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCQ38008.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
qs_7_scaffold_44_21
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23024..23857
DNA (834bp) protein (278aa)
Spermidine/putrescine ABC transporter permease n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUP7_9EURY
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY65519.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema v
potC; spermidine/putrescine ABC transporter permease
qs_7_scaffold_44_22
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23919..25634)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XY72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65518.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
groL; hypothetical protein
qs_7_scaffold_44_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25764..26234
DNA (471bp) protein (157aa)
bcp; peroxiredoxin (thioredoxin-dependent hydroperoxide peroxidase) (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MML9_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EMA46916.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
qs_7_scaffold_44_24
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26309..26872
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR55_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32841.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_7_scaffold_44_25
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26981..27877
DNA (897bp) protein (299aa)
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX8_HALVD
potB; spermidine/putrescine ABC transporter permease
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE02187.1}; Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY31421.1}; TaxID
qs_7_scaffold_44_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28136..28381)
DNA (246bp) protein (82aa)
Transposase ISHwa4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3C4_9EURY
Transposase ISHwa4 {ECO:0000313|EMBL:EMA52018.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
ISHwa4-type transposase
Displaying 26 items

View Taxonomy