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qs_7_scaffold_6067

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_6067_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..1121
DNA (1119bp) protein (373aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:ADB62459.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ADB62459.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobac
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RR63_HALTV
qs_7_scaffold_6067_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1118..2116
DNA (999bp) protein (333aa)
oxdhB; 2-oxoacid dehydrogenase E1 component, beta subunit (EC:1.2.4.-)
2-oxo-3-methylvalerate dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:CAI48370.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CAI48370.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Hal
Probable branched-chain amino acid dehydrogenase E1 component beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU13_NATPD
qs_7_scaffold_6067_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2120..3562
DNA (1443bp) protein (481aa)
dsa; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.-)
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:CAI48369.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48369.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Dihydrolipoamide S-acyltransferase (Probable E2 component of branched-chain amino acid dehydrogenase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU14_NATPD
qs_7_scaffold_6067_4
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3692..3937
DNA (246bp) protein (82aa)
Membrane protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8D3_9EURY
Membrane protein {ECO:0000313|EMBL:ELZ67094.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
membrane protein
qs_7_scaffold_6067_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4058..4801
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
qs_7_scaffold_6067_6
unknown

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5021..5137
DNA (117bp) protein (39aa)

This feature has no annotations

qs_7_scaffold_6067_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5104..5463)
DNA (360bp) protein (120aa)
CHP00725 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU16_NATPD
hypothetical protein
TIGR00725 family protein {ECO:0000313|EMBL:CAI48367.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
qs_7_scaffold_6067_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5512..5673)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48453.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_7_scaffold_6067_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5723..6493)
DNA (771bp) protein (257aa)
PHP domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA5_NATM8
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:CCQ35544.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_7_scaffold_6067_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6550..7545)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT3_NATPD
hypothetical protein
DUF4393 domain protein {ECO:0000313|EMBL:CAI48450.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_7_scaffold_6067_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9097..10146)
DNA (1050bp) protein (350aa)
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
Suspect SCG annotation. See neighboring gene [qs_7_scaffold_6067_12].
qs_7_scaffold_6067_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10143..11903)
DNA (1761bp) protein (587aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYA_NATPD
qs_7_scaffold_6067_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12268..14802
DNA (2535bp) protein (845aa)
ATP-dependent RNA helicase/nuclease Hef {ECO:0000313|EMBL:CAI48259.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CAI48259.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
ATP-dependent RNA helicase/nuclease Hef n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC2_NATPD
Hef nuclease
qs_7_scaffold_6067_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14912..15430
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UY56_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47797.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_7_scaffold_6067_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15438..15809)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L916_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28974.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_7_scaffold_6067_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16797..17534
DNA (738bp) protein (246aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN1_9EURY
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
qs_7_scaffold_6067_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17531..17776)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 17 items

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