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qs_7_scaffold_2127

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_2127_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..732)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_2127_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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856..2259
DNA (1404bp) protein (468aa)
Short-chain fatty acids transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J613_HALJB
short-chain fatty acids transporter
Short-chain fatty acids transporter {ECO:0000313|EMBL:ADJ13819.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
qs_7_scaffold_2127_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2272..3663
DNA (1392bp) protein (464aa)
Short chain fatty acid transporter n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4C5_HALXS
short chain fatty acid transporter
Short chain fatty acid transporter {ECO:0000313|EMBL:AEH38665.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
qs_7_scaffold_2127_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3667..5118
DNA (1452bp) protein (484aa)
Glutamyl-tRNA amidotransferase subunit A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX64_9EURY
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:EMA38172.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
glutamyl-tRNA amidotransferase subunit A
qs_7_scaffold_2127_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5211..5435
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG80_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43699.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_7_scaffold_2127_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5441..5965
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55179.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_2127_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6085..6414)
DNA (330bp) protein (110aa)
Haloacid dehalogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC80_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA43700.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
haloacid dehalogenase, type II
qs_7_scaffold_2127_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6625..7584
DNA (960bp) protein (320aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
translation initiation factor IF-2 subunit gamma
qs_7_scaffold_2127_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7830..8078
DNA (249bp) protein (83aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB32_9EURY
Suspect SCG annotation. See neighboring gene [qs_7_scaffold_2127_8].
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227456 species="Arc
tif2g; translation initiation factor IF-2 subunit gamma
qs_7_scaffold_2127_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8093..8461
DNA (369bp) protein (123aa)
Putative RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE3_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA55176.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
putative RNA-binding protein
qs_7_scaffold_2127_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8461..9033
DNA (573bp) protein (191aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EMA43703.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA43703.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoE'; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE0_9EURY
qs_7_scaffold_2127_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9036..9167
DNA (132bp) protein (44aa)
Transcription elongation factor Spt4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG84_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
DNA-directed RNA polymerase subunit E, RpoE2
Displaying 12 items

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