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qs_7_scaffold_1076

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_1076_1
unknown

Not on your lists

comp(1..72)
DNA (72bp) protein (24aa)

This feature has no annotations

qs_7_scaffold_1076_2
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186..1406)
DNA (1221bp) protein (407aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXT0_9RHIZ
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EDQ35717.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
hpsK; Dihydroxypropanesulfonate (DHPS) TRAP transporter
qs_7_scaffold_1076_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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1508..2662
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
qs_7_scaffold_1076_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2984..4168
DNA (1185bp) protein (395aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PD39_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA68032.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
peptidase M29 aminopeptidase II
qs_7_scaffold_1076_5
unknown

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4369..4722
DNA (354bp) protein (118aa)

This feature has no annotations

qs_7_scaffold_1076_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4862..5341)
DNA (480bp) protein (160aa)
ArCOG04150 universal archaeal PUA-domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXK6_9EURY
ArCOG04150 universal archaeal PUA-domain protein {ECO:0000313|EMBL:CDK41069.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
conserved protein with predicted RNA binding PUA domain
qs_7_scaffold_1076_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5430..5732
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_7_scaffold_1076_8
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6156..7493
DNA (1338bp) protein (446aa)
exoribonuclease II (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B044_9EURY
Ribonuclease R {ECO:0000313|EMBL:ELZ04160.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
qs_7_scaffold_1076_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7683..7832
DNA (150bp) protein (50aa)
UPF0391 membrane protein HacjB3_14695 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J949_HALJB
hypothetical protein
UPF0391 membrane protein HacjB3_14695 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halal
qs_7_scaffold_1076_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8061..9632)
DNA (1572bp) protein (524aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLQ0_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY50405.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
qs_7_scaffold_1076_11
unknown

Not on your lists

comp(10257..10424)
DNA (168bp) protein (56aa)

This feature has no annotations

qs_7_scaffold_1076_12
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10846..12420
DNA (1575bp) protein (525aa)
Trans-aconitate 2-methyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F353_9EURY
Modification methylase PaeR7I {ECO:0000313|EMBL:CQR49833.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
type I restriction-modification system methyltransferase
qs_7_scaffold_1076_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12377..13426
DNA (1050bp) protein (350aa)
Type i restriction-modification system methyltransferase subunit n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z4X0_9EURY
type I restriction-modification system methyltransferase
Type I restriction-modification system methyltransferase {ECO:0000313|EMBL:CCQ34096.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
qs_7_scaffold_1076_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13444..13560
DNA (117bp) protein (39aa)
Type I restriction-modification system methyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKV9_9EURY
type I restriction-modification system methyltransferase
Type I restriction-modification system methyltransferase {ECO:0000313|EMBL:CCQ34096.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
qs_7_scaffold_1076_trna_1
unknown

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comp(13740..13811)
DNA (72bp)
transferRNA
qs_7_scaffold_1076_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13914..14585)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_7_scaffold_1076_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14804..15331)
DNA (528bp) protein (176aa)
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;"
rps10; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=24629683 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
qs_7_scaffold_1076_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15332..16597)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_7_scaffold_1076_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16777..17826)
DNA (1050bp) protein (350aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qs_7_scaffold_1076_19
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17823..18365)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16654.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
Displaying 20 items

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