ggKbase home page

qs_7_scaffold_3070

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_3070_1
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76..687)
DNA (612bp) protein (204aa)
haloacid dehalogenase domain-containing protein hydrolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE63
Uncharacterized protein {ECO:0000313|EMBL:KKB61165.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia androp
hypothetical protein
qs_7_scaffold_3070_2
unknown

Not on your lists

862..1557
DNA (696bp) protein (232aa)

This feature has no annotations

qs_7_scaffold_3070_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2101..2631
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5Z0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30916.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_7_scaffold_3070_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2845..3879
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N861_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
radA; DNA repair and recombination protein RadA
qs_7_scaffold_3070_5
unknown

Not on your lists

comp(4055..4201)
DNA (147bp) protein (49aa)

This feature has no annotations

qs_7_scaffold_3070_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4389..5765
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Y2_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:EMA39790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
aldehyde dehydrogenase
qs_7_scaffold_3070_7
unknown

Not on your lists

comp(5873..5968)
DNA (96bp) protein (32aa)

This feature has no annotations

qs_7_scaffold_3070_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6158..6310
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=2 Tax=Halobacteriaceae RepID=F8DBV1_HALXS
50S ribosomal protein L39
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
qs_7_scaffold_3070_9
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6310..6588
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9S2_HALRX
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM
qs_7_scaffold_3070_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6692..7153
DNA (462bp) protein (154aa)
Translation initiation factor 6 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN11_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
qs_7_scaffold_3070_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7183..7500)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55076.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_3070_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7504..7779)
DNA (276bp) protein (92aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG42_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ22240.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
transcriptional regulator
qs_7_scaffold_3070_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8167..8361
DNA (195bp) protein (65aa)
50S ribosomal protein L18Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=RL18A_HALUD
50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=1033806 s
qs_7_scaffold_3070_14
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8358..8861
DNA (504bp) protein (168aa)
Prefoldin subunit alpha n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H002_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308, ECO:0000313|EMBL:ELZ77072.1}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteri
pfdA; prefoldin subunit alpha
qs_7_scaffold_3070_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8866..10164
DNA (1299bp) protein (433aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAH5_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobac
ftsY; signal recognition particle receptor SRalpha
qs_7_scaffold_3070_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10358..10807
DNA (450bp) protein (150aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAL3_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA42791.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
membrane-bound metal-dependent hydrolase
Displaying 16 items

View Taxonomy