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qs_7_scaffold_980

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_980_1
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3..401)
DNA (399bp) protein (133aa)
MarR family transcriptional regulator n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YBV4_9EURY
MarR family transcriptional regulator {ECO:0000313|EMBL:ELY71549.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme
hypothetical protein
qs_7_scaffold_980_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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854..1216
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSC3_9EURY
rpl7ae; 50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_7_scaffold_980_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1223..1438
DNA (216bp) protein (72aa)
30S ribosomal protein S28e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A479_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
30S ribosomal protein S28e
qs_7_scaffold_980_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1440..2177
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36460.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
50S ribosomal protein L24E
qs_7_scaffold_980_5
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2174..2650
DNA (477bp) protein (159aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J778_9EURY
qs_7_scaffold_980_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2789..3409)
DNA (621bp) protein (207aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSI7_9EURY
molybdopterin-guanine dinucleotide biosynthesis protein A
qs_7_scaffold_980_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3558..4670)
DNA (1113bp) protein (371aa)
Methionine synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L831_HALJP
Methionine synthase {ECO:0000313|EMBL:EMA29767.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
methionine synthase
qs_7_scaffold_980_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4667..5671)
DNA (1005bp) protein (335aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPA4_HALMO
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EMA47481.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
methionine synthase II (cobalamin-independent)
qs_7_scaffold_980_9
unknown

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6140..6304
DNA (165bp) protein (55aa)

This feature has no annotations

qs_7_scaffold_980_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6320..6934)
DNA (615bp) protein (205aa)
HemK-related putative methylase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIJ3_NATP1
Methyltransferase {ECO:0000313|EMBL:AKH98140.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfurir
HemK-related putative methylase
qs_7_scaffold_980_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6931..8145)
DNA (1215bp) protein (405aa)
mechanosensitive ion channel protein MscS id=24615380 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:ESP87134.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mechanosensitive ion channel MscS
qs_7_scaffold_980_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8142..8387)
DNA (246bp) protein (82aa)
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W304_9EURY
Displaying 12 items

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