ggKbase home page

qs_7_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 45 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_94_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24..1601)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44487.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_7_scaffold_94_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1745..2491
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPJ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24528.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_7_scaffold_94_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2647..3597
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036273D4
Uncharacterized protein {ECO:0000313|EMBL:ELZ44869.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
qs_7_scaffold_94_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3625..4752)
DNA (1128bp) protein (376aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGL6_9EURY
qs_7_scaffold_94_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4749..7199)
DNA (2451bp) protein (817aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIF9_9EURY
qs_7_scaffold_94_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7379..8671)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91036.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_7_scaffold_94_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9024..10937
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1227455 species="Archaea; Eu
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ91_9EURY
qs_7_scaffold_94_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11051..13657
DNA (2607bp) protein (869aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:EMA62867.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Halofe
DNA gyrase subunit A n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NY61_9EURY
qs_7_scaffold_94_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13856..14743)
DNA (888bp) protein (296aa)
Arginase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL9_9EURY
Arginase {ECO:0000313|EMBL:EMA55653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
arginase
qs_7_scaffold_94_10

Not on your lists

comp(14939..15853)
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2ML17_9ARCH
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN05418.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_7_scaffold_94_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16007..16531
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y0_HALJB
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:ELY36325.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ15597.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qs_7_scaffold_94_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16884..18038
DNA (1155bp) protein (385aa)
NADH dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY21_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:EMA49320.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
NADH dehydrogenase, FAD-containing subunit
qs_7_scaffold_94_13
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18223..19101)
DNA (879bp) protein (293aa)
udp1; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IEB6_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ93794.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;
qs_7_scaffold_94_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19098..19529)
DNA (432bp) protein (144aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF4_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ34561.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
qs_7_scaffold_94_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19850..21568)
DNA (1719bp) protein (573aa)
Phosphomannomutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV54_9EURY
Phosphomannomutase {ECO:0000313|EMBL:EMA49213.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qs_7_scaffold_94_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21728..22291
DNA (564bp) protein (188aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
qs_7_scaffold_94_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22447..22917)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49214.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_94_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23207..25540
DNA (2334bp) protein (778aa)
Type II secretion system protein E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBQ2_HALXS
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEH38320.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
qs_7_scaffold_94_19

Not on your lists

25537..26577
DNA (1041bp) protein (347aa)
Archaeal flagella assembly protein J n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y1Q2_9ARCH
Archaeal flagella assembly protein J {ECO:0000313|EMBL:ESS04867.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
type II secretion system, protein F
qs_7_scaffold_94_20
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26654..27526
DNA (873bp) protein (291aa)
Type II secretion system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIG7_9EURY
type II secretion system, protein F
Type II secretion system protein {ECO:0000313|EMBL:ERJ07059.1}; Type II secretion system, protein F {ECO:0000313|EMBL:CCQ34825.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobact
qs_7_scaffold_94_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27882..28253
DNA (372bp) protein (124aa)
Methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3P7_HALMO
Methyltransferase {ECO:0000313|EMBL:EMA40437.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
methyltransferase type 11
qs_7_scaffold_94_trna_1
unknown

Not on your lists

28337..28407
DNA (71bp)
transferRNA
qs_7_scaffold_94_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28525..32613)
DNA (4089bp) protein (1363aa)
Superfamily I DNA and RNA helicases and helicase subunits-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV29_RUBXD
Superfamily I DNA and RNA helicases and helicase subunits-like protein {ECO:0000313|EMBL:ABG04749.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae;
superfamily I DNA/RNA helicase
qs_7_scaffold_94_23
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(32792..34753)
DNA (1962bp) protein (654aa)
Adenine-specific DNA methylase containing a Zn-ribbon n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYA1_METI4
adenine-specific DNA methylase containing a Zn-ribbon
Adenine-specific DNA methylase containing a Zn-ribbon {ECO:0000313|EMBL:ACD82378.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphil
qs_7_scaffold_94_24
unknown

Not on your lists

comp(35198..35470)
DNA (273bp) protein (91aa)

This feature has no annotations

qs_7_scaffold_94_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(35643..36425)
DNA (783bp) protein (261aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
qs_7_scaffold_94_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(36499..37503)
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
qs_7_scaffold_94_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37780..38892)
DNA (1113bp) protein (371aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qs_7_scaffold_94_28
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(38967..39263)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A3T6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92532.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qs_7_scaffold_94_29
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(39270..39680)
DNA (411bp) protein (137aa)
Prefoldin subunit beta n=1 Tax=Natronococcus occultus SP4 RepID=L0JWZ4_9EURY
prefoldin, beta subunit, archaeal
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
Displaying items 1-30 of 45 in total

View Taxonomy