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qs_7_scaffold_348

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_348_1
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..480)
DNA (480bp) protein (160aa)
TonB-denpendent receptor n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B66325
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII54371.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
qs_7_scaffold_348_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(832..1374)
DNA (543bp) protein (181aa)
rbsR; ribose operon repressor
Ribose operon repressor {ECO:0000313|EMBL:CBH23367.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
rbsR; ribose operon repressor id=24657221 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_7_scaffold_348_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1714..2946)
DNA (1233bp) protein (411aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Salisaeta longa RepID=UPI0003B6FA2E
1-deoxy-D-xylulose 5-phosphate reductoisomerase
qs_7_scaffold_348_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3085..5010
DNA (1926bp) protein (642aa)
Tetratricopeptide repeat domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1G9_SALRD
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43860.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_7_scaffold_348_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5110..6384
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_348_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6629..8374
DNA (1746bp) protein (582aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H546_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23151.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_7_scaffold_348_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8741..9661
DNA (921bp) protein (307aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKD8_RHOM4
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ACY48850.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothe
qs_7_scaffold_348_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9766..11067
DNA (1302bp) protein (434aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
seryl-tRNA synthase n=1 Tax=Salisaeta longa RepID=UPI0003B4AC01
serS; seryl-tRNA synthetase
qs_7_scaffold_348_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11634..12356
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H608_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44272.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_7_scaffold_348_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12584..14389)
DNA (1806bp) protein (602aa)
GTP-binding protein TypA n=1 Tax=Salisaeta longa RepID=UPI0003B7BB04
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:CBH23462.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_7_scaffold_348_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14860..15480)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Holliday junction DNA helicase RuvA n=1 Tax=Salisaeta longa RepID=UPI0003B74024
ruvA; Holliday junction DNA helicase ruvA
qs_7_scaffold_348_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15639..17315)
DNA (1677bp) protein (559aa)
NAD synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B485BF
NAD(+) synthase
NAD(+) synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:ABC43794.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_7_scaffold_348_13
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17519..18166)
DNA (648bp) protein (216aa)
NmrA family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS94_TRURR
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADI13626.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 1
qs_7_scaffold_348_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18370..18741
DNA (372bp) protein (124aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHE0_RHOMR
NAD(P)H-quinone oxidoreductase subunit 3
qs_7_scaffold_348_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18983..19591
DNA (609bp) protein (203aa)
nuoB; NADH-quinone oxidoreductase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=24657245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit B; EC=1.6.5.11;; NADH dehydrogenase I subunit B; NDH-1 subunit B; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nuoB; NADH-quinone oxidoreductase subunit B
qs_7_scaffold_348_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19670..20377
DNA (708bp) protein (236aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBH23392.1};; NADH dehydrogenase I subunit C {ECO
NADH-quinone oxidoreductase subunit C n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5T7_SALRM
nuoC; NADH-quinone oxidoreductase subunit C/D
qs_7_scaffold_348_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20508..21815
DNA (1308bp) protein (436aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D n=1 Tax=Salisaeta longa RepID=UPI0003B4F6B3
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa
qs_7_scaffold_348_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21957..22622
DNA (666bp) protein (222aa)
NADH-quinone oxidoreductase subunit E n=1 Tax=Salisaeta longa RepID=UPI0003B7299C
nuoE; NADH dehydrogenase (ubiquinone), 24 kDa subunit
NADH-ubiquinone oxidoreductase 24 kDa subunit, putative {ECO:0000313|EMBL:ABC45977.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_7_scaffold_348_19
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22839..24515
DNA (1677bp) protein (559aa)
N-sulfoglucosamine sulfohydrolase (EC:3.10.1.1)
N-sulfoglucosamine sulfohydrolase {ECO:0000313|EMBL:ADY60455.1}; EC=3.10.1.1 {ECO:0000313|EMBL:ADY60455.1};; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctom
N-sulfoglucosamine sulfohydrolase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SFJ5_PLABD
qs_7_scaffold_348_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24607..25332
DNA (726bp) protein (242aa)
NADH dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B66F9F
Nqo1 {ECO:0000313|EMBL:AAY43000.1}; TaxID=29549 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (Rhodothermus ob
NADH-quinone oxidoreductase subunit F
Displaying 20 items

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