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qs_7_scaffold_1218

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_1218_1
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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457..696
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PK74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF61318.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
qs_7_scaffold_1218_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1002..2696
DNA (1695bp) protein (565aa)
(R)-citramalate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R281_HALMT
(R)-citramalate synthase
(R)-citramalate synthase {ECO:0000313|EMBL:ADJ15945.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qs_7_scaffold_1218_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3256..4176
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0R2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50684.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_1218_4
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4533..4766)
DNA (234bp) protein (78aa)
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH00010.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="H
regulator of stationary/sporulation gene expression
regulator of stationary/sporulation gene expression id=24624666 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
qs_7_scaffold_1218_5
unknown

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5036..5248
DNA (213bp) protein (71aa)

This feature has no annotations

qs_7_scaffold_1218_6
unknown

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comp(5258..5557)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_7_scaffold_1218_7
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5680..6093
DNA (414bp) protein (138aa)
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8H3_HALRX
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:AGB15108.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax
qs_7_scaffold_1218_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6134..6823
DNA (690bp) protein (230aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSC7_HALMO
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:EMA47649.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
qs_7_scaffold_1218_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6919..7059)
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA38808.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_7_scaffold_1218_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7519..8232)
DNA (714bp) protein (238aa)
accB_2; acyl-CoA carboxylase 2, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Carboxyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR20_9EURY
Carboxyl transferase {ECO:0000313|EMBL:ELZ25671.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
qs_7_scaffold_1218_11
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8597..9193
DNA (597bp) protein (199aa)
Predicted acetyl-CoA carboxylase n=1 Tax=uncultured bacterium MedeBAC46A06 RepID=Q4PJD9_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
qs_7_scaffold_1218_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9250..9735
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37803.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_7_scaffold_1218_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9736..10734)
DNA (999bp) protein (333aa)
Transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAQ5_HALJB
sodium-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
Displaying 13 items

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