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qs_7_scaffold_328

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_328_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1788
DNA (1788bp) protein (596aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
qs_7_scaffold_328_2
unknown

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1861..2070
DNA (210bp) protein (70aa)

This feature has no annotations

qs_7_scaffold_328_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2540..3340
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qs_7_scaffold_328_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3604..4296)
DNA (693bp) protein (231aa)
Diaminobutyrate--pyruvate aminotransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9Z8_9EURY
Diaminobutyrate--pyruvate aminotransferase {ECO:0000313|EMBL:ELZ31527.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
2,4-diaminobutyrate 4-transaminase
qs_7_scaffold_328_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4597..4977)
DNA (381bp) protein (127aa)
2,4-diaminobutyrate 4-transaminase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GQR1_9EURY
2,4-diaminobutyrate 4-transaminase {ECO:0000313|EMBL:ESP87376.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
2,4-diaminobutyrate 4-transaminase
qs_7_scaffold_328_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5356..6120)
DNA (765bp) protein (255aa)
sec11b; signal peptidase I (EC:3.4.-.-)
Signal peptidase I-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5I6_9EURY
Signal peptidase I-like protein {ECO:0000313|EMBL:EMA40966.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
qs_7_scaffold_328_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6222..8000
DNA (1779bp) protein (593aa)
polA1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=348780 species="Archaea; Euryar
DNA-directed DNA polymerase D exonuclease subunit DP1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU51_NATPD
qs_7_scaffold_328_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8222..8386
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWG5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48785.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qs_7_scaffold_328_9
unknown

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comp(8366..8476)
DNA (111bp) protein (37aa)

This feature has no annotations

qs_7_scaffold_328_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8489..9358
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWG5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48785.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_7_scaffold_328_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9410..9649
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MT34_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48786.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
protein of unknown function DUF217
qs_7_scaffold_328_12

Not on your lists

9655..10047
DNA (393bp) protein (131aa)
Putative nucleic acid-binding protein, contains PIN domain protein (Fragment) n=1 Tax=uncultured archaeon A07HN63 RepID=V4YBS9_9ARCH
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ESS08562.1}; Flags: Fragment;; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
twitching motility protein PilT
qs_7_scaffold_328_13
unknown

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10172..10303
DNA (132bp) protein (44aa)

This feature has no annotations

qs_7_scaffold_328_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10495..11925)
DNA (1431bp) protein (477aa)
Amino acid permease n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNS6_HALJP
Amino acid permease {ECO:0000313|EMBL:EMA33685.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
amino acid permease-associated protein
qs_7_scaffold_328_15

Not on your lists

comp(11922..12251)
DNA (330bp) protein (110aa)
K+ transport system, NAD-binding component n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y6W5_9ARCH
K+ transport system, NAD-binding component {ECO:0000313|EMBL:ESS06797.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
trkA3; TRK potassium uptake system protein
qs_7_scaffold_328_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12810..13889)
DNA (1080bp) protein (360aa)
pepB2; aminopeptidase (homolog to leucyl aminopeptidase / aminopeptidase T) (EC:3.4.11.-)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CCQ35306.1}; EC=3.4.11.- {ECO:0000313|EMBL:CCQ35306.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK58_NATM8
qs_7_scaffold_328_17
unknown

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comp(14145..14363)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 17 items

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